RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 TMOD3Q9NYL9 352 aa7.43□□□□□ -1.22
SSR3-207ENST00000478842 PLA2G2DQ9UNK4 145 aa7.43□□□□□ -1.22
SSR3-207ENST00000478842 KDM6AO15550 1401 aaPredicted RBP7.43□□□□□ -1.22
SSR3-207ENST00000478842 NCAPD2Q15021 1401 aa7.43□□□□□ -1.22
SSR3-207ENST00000478842 MYOCOSA0A1B0GUC4 107 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 KLHL33A6NCF5 533 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 GLTPD2A6NH11 291 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 N4BP3O15049 544 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 RPS6KA4O75676 772 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 APOL3O95236 402 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 GYS1P13807 737 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 MC4RP32245 332 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 RFC4P35249 363 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 RECQLP46063 649 aaPredicted RBP7.42□□□□□ -1.22
SSR3-207ENST00000478842 CDR1P51861 262 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 MANFP55145 182 aaKnown RBP7.42□□□□□ -1.22
SSR3-207ENST00000478842 RRS1Q15050 365 aaKnown RBP7.42□□□□□ -1.22
SSR3-207ENST00000478842 UGT8Q16880 541 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 TMC5Q6UXY8 1006 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 LIPIQ6XZB0 460 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 KANSL1Q7Z3B3 1105 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 SMARCC2Q8TAQ2 1214 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 CLIC6Q96NY7 704 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 MYL10Q9BUA6 226 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 CDH19Q9H159 772 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 TCF7L1Q9HCS4 588 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 ZIM2Q9NZV7 527 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 ARHGAP20Q9P2F6 1191 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 ASAP1Q9ULH1 1129 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 NUMBLQ9Y6R0 609 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 FLT4P35916 1363 aa7.42□□□□□ -1.22
SSR3-207ENST00000478842 CCDC88AQ3V6T2 1871 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 LCHNA4D1U4 455 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 FYB1O15117 783 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 MAFO75444 373 aaPredicted RBP7.41□□□□□ -1.22
SSR3-207ENST00000478842 CHGBP05060 677 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 IGFBP6P24592 240 aaPredicted RBP7.41□□□□□ -1.22
SSR3-207ENST00000478842 APEX1P27695 318 aaKnown RBP7.41□□□□□ -1.22
SSR3-207ENST00000478842 MYBPC3Q14896 1274 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 MLANAQ16655 118 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 CXXC5Q7LFL8 322 aaKnown RBP7.41□□□□□ -1.22
SSR3-207ENST00000478842 CMIPQ8IY22 773 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 TTLL6Q8N841 843 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 CCDC136Q96JN2 1154 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 AMNQ9BXJ7 453 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 CARD11Q9BXL7 1154 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 ANO3Q9BYT9 981 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 OR10A5Q9H207 317 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 SEMA4AQ9H3S1 761 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 LUC7LQ9NQ29 371 aaKnown RBP7.41□□□□□ -1.22
SSR3-207ENST00000478842 CCM2LQ9NUG4 571 aaPredicted RBP7.41□□□□□ -1.22
SSR3-207ENST00000478842 DNAJC28Q9NX36 388 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.41□□□□□ -1.22
SSR3-207ENST00000478842 LUC7L2Q9Y383 392 aaKnown RBP7.41□□□□□ -1.22
SSR3-207ENST00000478842 KDRP35968 1356 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 TONSLQ96HA7 1378 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 KIF20BQ96Q89 1820 aa7.41□□□□□ -1.22
SSR3-207ENST00000478842 FZD9O00144 591 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 TSPAN6O43657 245 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 ABLIM3O94929 683 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 ATF2P15336 505 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 MC3RP41968 323 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 RGS3P49796 1198 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 NCKAP1LP55160 1127 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 MRPS9P82933 396 aaKnown RBP7.4□□□□□ -1.22
SSR3-207ENST00000478842 CLUL1Q15846 466 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 TMEM240Q5SV17 173 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 CCDC62Q6P9F0 684 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 RAVER1Q8IY67 606 aaKnown RBP7.4□□□□□ -1.22
SSR3-207ENST00000478842 CHPFQ8IZ52 775 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 IFNL2Q8IZJ0 200 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 RBPJLQ9UBG7 517 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 ZNF180Q9UJW8 692 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 PPP2R3BQ9Y5P8 575 aa7.4□□□□□ -1.22
SSR3-207ENST00000478842 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
SSR3-207ENST00000478842 DLEC1Q9Y238 1755 aa7.4□□□□□ -1.23
SSR3-207ENST00000478842 MYH14Q7Z406 1995 aaKnown RBP7.4□□□□□ -1.23
SSR3-207ENST00000478842 DICER1Q9UPY3 1922 aaKnown RBP7.39□□□□□ -1.23
SSR3-207ENST00000478842 TIAM2Q8IVF5 1701 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 ANKRD26Q9UPS8 1709 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 PRSS38A1L453 326 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 ERVV-2B6SEH9 535 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 ELL2O00472 640 aaPredicted RBP7.39□□□□□ -1.23
SSR3-207ENST00000478842 H2AFYO75367 372 aaKnown RBP7.39□□□□□ -1.23
SSR3-207ENST00000478842 RFPL1O75677 317 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 CT47B1P0C2W7 299 aaPredicted RBP7.39□□□□□ -1.23
SSR3-207ENST00000478842 U2AF1L5P0DN76 240 aaPredicted RBP7.39□□□□□ -1.23
SSR3-207ENST00000478842 PHKG2P15735 406 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 VCAM1P19320 739 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 ITGA1P56199 1179 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 FOXO4P98177 505 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 U2AF1Q01081 240 aaKnown RBP eCLIP7.39□□□□□ -1.232e-12■■■■□ 19.4
SSR3-207ENST00000478842 MAP3K12Q12852 859 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 NFATC3Q12968 1075 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 STILQ15468 1287 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.39□□□□□ -1.23
SSR3-207ENST00000478842 IGDCC3Q8IVU1 814 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 KYQ8NBH2 561 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 TGFBRAP1Q8WUH2 860 aa7.39□□□□□ -1.23
SSR3-207ENST00000478842 RELTQ969Z4 430 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms