RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 VPS72Q15906 364 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 IQSEC1Q6DN90 963 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 PPM1KQ8N3J5 372 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 OR5M3Q8NGP4 307 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 GAB3Q8WWW8 586 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 FEZ1Q99689 392 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 LSM14BQ9BX40 385 aaKnown RBP6.09□□□□□ -1.43
LMBR1-216ENST00000477983 TMPRSS11EQ9UL52 423 aa6.09□□□□□ -1.43
LMBR1-216ENST00000477983 MRPL42Q9Y6G3 142 aaKnown RBP6.09□□□□□ -1.43
LMBR1-216ENST00000477983 MAGI3Q5TCQ9 1506 aa6.09□□□□□ -1.44
LMBR1-216ENST00000477983 NUP153P49790 1475 aaKnown RBP6.09□□□□□ -1.44
LMBR1-216ENST00000477983 PTPRGP23470 1445 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 ST20-MTHFSA0A0A6YYL1 179 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 PRSS38A1L453 326 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 PPFIA2O75334 1257 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 ZFP36P26651 326 aaKnown RBP6.08□□□□□ -1.44
LMBR1-216ENST00000477983 LSP1P33241 339 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 GZMKP49863 264 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 PTPAQ15257 358 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 SEPT7Q16181 437 aaKnown RBP6.08□□□□□ -1.44
LMBR1-216ENST00000477983 LRRC55Q6ZSA7 311 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 GPRIN1Q7Z2K8 1008 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 JAZF1Q86VZ6 243 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 VRK3Q8IV63 474 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 AHI1Q8N157 1196 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 CPT1CQ8TCG5 803 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 PROKR1Q8TCW9 393 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 RSAD2Q8WXG1 361 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 IL17RAQ96F46 866 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 CRAMP1Q96RY5 1269 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 NDC1Q9BTX1 674 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 TARS2Q9BW92 718 aaKnown RBP6.08□□□□□ -1.44
LMBR1-216ENST00000477983 CPEB1Q9BZB8 566 aaKnown RBP6.08□□□□□ -1.44
LMBR1-216ENST00000477983 WNT8AQ9H1J5 351 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 KCNH6Q9H252 994 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 PACSIN3Q9UKS6 424 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 USP18Q9UMW8 372 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 PLAAQ9Y263 795 aa6.08□□□□□ -1.44
LMBR1-216ENST00000477983 AHRRA9YTQ3 701 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 ABHD16AO95870 558 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 TGM1P22735 817 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 XPAP23025 273 aaPredicted RBP6.07□□□□□ -1.44
LMBR1-216ENST00000477983 OCRLQ01968 901 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 FSTL1Q12841 308 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 TERF2Q15554 542 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 PLEKHG4Q58EX7 1191 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 DALRD3Q5D0E6 543 aaKnown RBP6.07□□□□□ -1.44
LMBR1-216ENST00000477983 LYSMD2Q8IV50 215 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 SLC41A1Q8IVJ1 513 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 MSL3Q8N5Y2 521 aaKnown RBP6.07□□□□□ -1.44
LMBR1-216ENST00000477983 FERMT2Q96AC1 680 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 MFSD3Q96ES6 412 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 MYEOVQ96EZ4 313 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.07□□□□□ -1.44
LMBR1-216ENST00000477983 MYOM3Q5VTT5 1437 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 FGD6Q6ZV73 1430 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 SHROOM2Q13796 1616 aa6.07□□□□□ -1.44
LMBR1-216ENST00000477983 ERCC6L2Q5T890 1561 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 CLASP1Q7Z460 1538 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 GRID2IPA4D2P6 1211 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 SCAF4O95104 1147 aaKnown RBP6.06□□□□□ -1.44
LMBR1-216ENST00000477983 GYPEP15421 78 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 LSSP48449 732 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 SCNN1BP51168 640 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 PTTG1IPP53801 180 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 NRG3P56975 720 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 TAP1Q03518 808 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 SART3Q15020 963 aaKnown RBP6.06□□□□□ -1.44
LMBR1-216ENST00000477983 KCNV1Q6PIU1 500 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 FRMD7Q6ZUT3 714 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 GPR150Q8NGU9 434 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 GPR101Q96P66 508 aaPredicted RBP6.06□□□□□ -1.44
LMBR1-216ENST00000477983 DCLRE1CQ96SD1 692 aaKnown RBP6.06□□□□□ -1.44
LMBR1-216ENST00000477983 SLC46A2Q9BY10 475 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 SPTLC3Q9NUV7 552 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 PRSS50Q9UI38 385 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 CLCA2Q9UQC9 943 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 SETD5Q9C0A6 1442 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 ABCA8O94911 1581 aa6.06□□□□□ -1.44
LMBR1-216ENST00000477983 PLEKHD1A6NEE1 506 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 LMNAP02545 664 aaKnown RBP6.05□□□□□ -1.44
LMBR1-216ENST00000477983 LAG3P18627 525 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 BMP5P22003 454 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 DUSP2Q05923 314 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 UBE3CQ15386 1083 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 TIGD2Q4W5G0 525 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 C19orf54Q5BKX5 351 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 KIAA0907Q7Z7F0 614 aaPredicted RBP6.05□□□□□ -1.44
LMBR1-216ENST00000477983 OR2W6PQ8NHA6 318 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 EPC1Q9H2F5 836 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 ZNF768Q9H5H4 540 aaKnown RBP6.05□□□□□ -1.44
LMBR1-216ENST00000477983 DKK2Q9UBU2 259 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 PCSK5Q92824 1860 aa6.05□□□□□ -1.44
LMBR1-216ENST00000477983 ARHGEF11O15085 1522 aa6.04□□□□□ -1.44
LMBR1-216ENST00000477983 ATP10BO94823 1461 aa6.04□□□□□ -1.44
LMBR1-216ENST00000477983 PTPN23Q9H3S7 1636 aa6.04□□□□□ -1.44
LMBR1-216ENST00000477983 LCHNA4D1U4 455 aa6.04□□□□□ -1.44
LMBR1-216ENST00000477983 TMEM200CA6NKL6 621 aa6.04□□□□□ -1.44
LMBR1-216ENST00000477983 ADCYAP1R1P41586 468 aa6.04□□□□□ -1.44
LMBR1-216ENST00000477983 MANFP55145 182 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms