RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 DHX33Q9H6R0 707 aaKnown RBP22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 CDV3Q9UKY7 258 aaKnown RBP22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 PPME1Q9Y570 386 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 CHD6Q8TD26 2715 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 USP24Q9UPU5 2620 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 CYP3A7-CYP3A51PA0A087WV96 503 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 PRR5-ARHGAP8B1AHC4 643 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 SRGAP2CP0DJJ0 459 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 CYP3A7P24462 503 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 NPEPPSP55786 919 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 ARHGAP8P85298 464 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 AKAP17AQ02040 695 aaKnown RBP22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 CSTF1Q05048 431 aaKnown RBP22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 LAMTOR4Q0VGL1 99 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 UBXN2BQ14CS0 331 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 GLYCTKQ8IVS8 523 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 ATRIPQ8WXE1 791 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 NELL1Q92832 810 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 SECISBP2LQ93073 1101 aaKnown RBP22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 TMEM143Q96AN5 459 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 CCDC51Q96ER9 411 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 COLEC11Q9BWP8 271 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 RNF26Q9BY78 433 aaPredicted RBP22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 RNF39Q9H2S5 420 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 VPS54Q9P1Q0 977 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 FBXW11Q9UKB1 542 aa22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 MTF2Q9Y483 593 aaPredicted RBP22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 TDRD15B5MCY1 1934 aaKnown RBP22.62■■□□□ 1.21
PDLIM1-202ENST00000477757 CFAP47Q6ZTR5 3102 aa22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 LILRB5O75023 590 aa22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 ERLIN2O94905 339 aa22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 HMGB1P09429 215 aaKnown RBP22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 RPL17P18621 184 aaKnown RBP22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 RFC5P40937 340 aa22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 KRT32Q14532 448 aa22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 RSPO2Q6UXX9 243 aaPredicted RBP22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 GRASPQ7Z6J2 395 aaPredicted RBP22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 EXOC8Q8IYI6 725 aa22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 C22orf23Q9BZE7 217 aa22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 ZSCAN32Q9NX65 697 aa22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 MIOSQ9NXC5 875 aa22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 HES2Q9Y543 173 aa22.61■■□□□ 1.21
PDLIM1-202ENST00000477757 TSPAN1O60635 241 aa22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 HNRNPA1P09651 372 aaKnown RBP eCLIP22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 FGD1P98174 961 aa22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 PFKPQ01813 784 aa22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 PCBP1Q15365 356 aaKnown RBP eCLIP22.6■■□□□ 1.218e-8■■■□□ 14.8
PDLIM1-202ENST00000477757 SLC44A4Q53GD3 710 aa22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 NOTUMQ6P988 496 aa22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 MOXD1Q6UVY6 613 aa22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 ZNF579Q8NAF0 562 aaKnown RBP22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 RNF149Q8NC42 400 aa22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 FGF13Q92913 245 aa22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 LTB4R2Q9NPC1 389 aa22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 ADAM28Q9UKQ2 775 aa22.6■■□□□ 1.21
PDLIM1-202ENST00000477757 FAM170BA6NMN3 283 aa22.59■■□□□ 1.21
PDLIM1-202ENST00000477757 AXLP30530 894 aa22.59■■□□□ 1.21
PDLIM1-202ENST00000477757 QARSP47897 775 aaKnown RBP22.59■■□□□ 1.21
PDLIM1-202ENST00000477757 NTRK3Q16288 839 aa22.59■■□□□ 1.21
PDLIM1-202ENST00000477757 CEP170P1Q96L14 293 aa22.59■■□□□ 1.21
PDLIM1-202ENST00000477757 RTKNQ9BST9 563 aa22.59■■□□□ 1.21
PDLIM1-202ENST00000477757 SH3GLB2Q9NR46 395 aa22.59■■□□□ 1.21
PDLIM1-202ENST00000477757 GIT1Q9Y2X7 761 aa22.59■■□□□ 1.21
PDLIM1-202ENST00000477757 ZMYM2Q9UBW7 1377 aa22.59■■□□□ 1.21
PDLIM1-202ENST00000477757 EML1O00423 815 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 DKC1O60832 514 aaKnown RBP eCLIP22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 TGM1P22735 817 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 NTHL1P78549 312 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 EMC2Q15006 297 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 RTP2Q5QGT7 225 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 LIN9Q5TKA1 542 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 FERMT3Q86UX7 667 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 GSTCDQ8NEC7 633 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 TCP11Q8WWU5 503 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 BRF1Q92994 677 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 CLDN23Q96B33 292 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 SLC26A6Q9BXS9 759 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 CSRNP2Q9H175 543 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 PRMT8Q9NR22 394 aaPredicted RBP22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 VAV3Q9UKW4 847 aa22.58■■□□□ 1.21
PDLIM1-202ENST00000477757 SF3B1O75533 1304 aaKnown RBP eCLIP22.57■■□□□ 1.21e-8■■■■■ 103.4
PDLIM1-202ENST00000477757 ARID2Q68CP9 1835 aa22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 DOCK6Q96HP0 2047 aa22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 ASAP2O43150 1006 aa22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 HOXA9P31269 272 aa22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 PPP2R5CQ13362 524 aa22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 ZBTB41Q5SVQ8 909 aa22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 PRSS55Q6UWB4 352 aaPredicted RBP22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 HACE1Q8IYU2 909 aa22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 APOL6Q9BWW8 343 aa22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 NXF3Q9H4D5 531 aaKnown RBP22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 BMP2KQ9NSY1 1161 aaPredicted RBP22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 WRAP73Q9P2S5 460 aaPredicted RBP22.57■■□□□ 1.2
PDLIM1-202ENST00000477757 TBC1D4O60343 1298 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 CPA1P15085 419 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 IFNAR1P17181 557 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 CD72P21854 359 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 RPS9P46781 194 aaKnown RBP22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 NLRP5P59047 1200 aa22.56■■□□□ 1.2
PDLIM1-202ENST00000477757 GRIK3Q13003 919 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms