RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 NCAPHQ15003 741 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 CCDC178Q5BJE1 867 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 RNF187Q5TA31 235 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 NAA35Q5VZE5 725 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 BLOC1S2Q6QNY1 142 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 FAM196AQ6ZSG2 479 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 ZNF572Q7Z3I7 529 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 FRMD5Q7Z6J6 570 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 CROCCP2Q86T23 111 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 LCA5Q86VQ0 697 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 PPFIBP1Q86W92 1011 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 IGDCC3Q8IVU1 814 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 MREGQ8N565 214 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 ATL2Q8NHH9 583 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 RASSF8Q8NHQ8 419 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 ZNF473Q8WTR7 871 aaKnown RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 MZB1Q8WU39 189 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 PPP2R3CQ969Q6 453 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 GFM2Q969S9 779 aaKnown RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 RILPL2Q969X0 211 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 MAML3Q96JK9 1138 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 CLIC6Q96NY7 704 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 PNKPQ96T60 521 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 NAP1L3Q99457 506 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 GORASP1Q9BQQ3 440 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 BHMT2Q9H2M3 363 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 CENPHQ9H3R5 247 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 HAUS4Q9H6D7 363 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 TRPV5Q9NQA5 729 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 TUBA8Q9NY65 449 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 SUN2Q9UH99 717 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 TUBE1Q9UJT0 475 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 ADAM30Q9UKF2 790 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 DAAM1Q9Y4D1 1078 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 CTDP1Q9Y5B0 961 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.17□□□□□ -1.58
PTCD3-212ENST00000477520 SLC4A7Q9Y6M7 1214 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 ITIH6Q6UXX5 1313 aa5.17□□□□□ -1.58
PTCD3-212ENST00000477520 THSD7AQ9UPZ6 1657 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 GMNCA6NCL1 334 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 PSMD14O00487 310 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 RNMTO43148 476 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 SMIM24O75264 130 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 CILPO75339 1184 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 ATP6V1G2O95670 118 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 CCDC166P0CW27 439 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 ALADP13716 330 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 CMA1P23946 247 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 MAPK1P28482 360 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 ALDH1B1P30837 517 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 ALDH3A1P30838 453 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 MDH1P40925 334 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 FMR1Q06787 632 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 BIRC3Q13489 604 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 ZNF268Q14587 947 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 RTP5Q14D33 572 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 NECTIN1Q15223 517 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 SF3A1Q15459 793 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 PTGISQ16647 500 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 ME3Q16798 604 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 CCDC181Q5TID7 509 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 PAPD7Q5XG87 772 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 HHIPL2Q6UWX4 724 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 LRIG3Q6UXM1 1119 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 RUFY4Q6ZNE9 571 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 NOL8Q76FK4 1167 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 MAATS1Q7Z4T9 603 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 NLRP14Q86W24 1093 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 CACNA2D3Q8IZS8 1091 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 LRRC43Q8N309 656 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 MMGT1Q8N4V1 131 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 LINC01356Q8N9X3 169 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 FSIP1Q8NA03 581 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 MLKLQ8NB16 471 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 ENOX1Q8TC92 643 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 PARD3BQ8TEW8 1205 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 SH3TC2Q8TF17 1288 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 NSMCE1Q8WV22 266 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 ZBTB10Q96DT7 871 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 THOC1Q96FV9 657 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 IFT74Q96LB3 600 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 PWWP2AQ96N64 755 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 SCLT1Q96NL6 688 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 CCT8L2Q96SF2 557 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 SELENOOQ9BVL4 669 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 TRIM4Q9C037 500 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 MIS12Q9H081 205 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 NRDE2Q9H7Z3 1164 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 NOD2Q9HC29 1040 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 DMAP1Q9NPF5 467 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 CRTAC1Q9NQ79 661 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 ZNHIT6Q9NWK9 470 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 UTP6Q9NYH9 597 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 LARSQ9P2J5 1176 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 BIN2Q9UBW5 565 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 DDX25Q9UHL0 483 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 TPCN1Q9ULQ1 816 aa5.16□□□□□ -1.58
PTCD3-212ENST00000477520 RPL26L1Q9UNX3 145 aaKnown RBP5.16□□□□□ -1.58
PTCD3-212ENST00000477520 DLG5Q8TDM6 1919 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms