RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 KYAT1Q16773 422 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 ZNF568Q3ZCX4 644 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 L1TD1Q5T7N2 865 aaKnown RBP14.38□□□□□ -0.11
TOP3A-205ENST00000477508 SLFN12LQ6IEE8 588 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 SMG8Q8ND04 991 aaKnown RBP14.38□□□□□ -0.11
TOP3A-205ENST00000477508 URGCPQ8TCY9 931 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 TGS1Q96RS0 853 aaKnown RBP14.38□□□□□ -0.11
TOP3A-205ENST00000477508 RSAD1Q9HA92 442 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 AAASQ9NRG9 546 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 EXOC1Q9NV70 894 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 TBC1D7Q9P0N9 293 aa14.38□□□□□ -0.11
TOP3A-205ENST00000477508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.37□□□□□ -0.11
TOP3A-205ENST00000477508 LCHNA4D1U4 455 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 GADD45BO75293 160 aaPredicted RBP14.37□□□□□ -0.11
TOP3A-205ENST00000477508 NR1I2O75469 434 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 SMC2O95347 1197 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 EDN1P05305 212 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 ERVK-21P61565 698 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 MCL1Q07820 350 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 EHHADHQ08426 723 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 NOLC1Q14978 699 aaKnown RBP eCLIP14.37□□□□□ -0.11
TOP3A-205ENST00000477508 POSTNQ15063 836 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 ZC2HC1CQ53FD0 456 aaPredicted RBP14.37□□□□□ -0.11
TOP3A-205ENST00000477508 NOMO2Q5JPE7 1267 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 CLLU1OSQ5K130 101 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 EEF1DP3Q658K8 133 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 AGMOQ6ZNB7 445 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 CDR2LQ86X02 465 aaPredicted RBP14.37□□□□□ -0.11
TOP3A-205ENST00000477508 GRAMD1CQ8IYS0 662 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 SYCP3Q8IZU3 236 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 LRRC43Q8N309 656 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 CLP1Q92989 425 aaKnown RBP14.37□□□□□ -0.11
TOP3A-205ENST00000477508 CASD1Q96PB1 797 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 CCDC94Q9BW85 323 aaPredicted RBP14.37□□□□□ -0.11
TOP3A-205ENST00000477508 GTPBP4Q9BZE4 634 aaKnown RBP14.37□□□□□ -0.11
TOP3A-205ENST00000477508 CDT1Q9H211 546 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 NXF3Q9H4D5 531 aaKnown RBP14.37□□□□□ -0.11
TOP3A-205ENST00000477508 RNF19AQ9NV58 838 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 UBE4BO95155 1302 aa14.37□□□□□ -0.11
TOP3A-205ENST00000477508 FNDC1Q4ZHG4 1894 aaPredicted RBP14.36□□□□□ -0.11
TOP3A-205ENST00000477508 RBAK-RBAKDNI3L0D1 243 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 INPPL1O15357 1258 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 OFD1O75665 1012 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 KIF20AO95235 890 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 RPN1P04843 607 aaKnown RBP14.36□□□□□ -0.11
TOP3A-205ENST00000477508 RB1P06400 928 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 CASP1P29466 404 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 GRM5P41594 1212 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 MATR3P43243 847 aaKnown RBP eCLIP14.36□□□□□ -0.11
TOP3A-205ENST00000477508 SNRPFP62306 86 aaKnown RBP14.36□□□□□ -0.11
TOP3A-205ENST00000477508 DPYDQ12882 1025 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 KCNB1Q14721 858 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 PAN2Q504Q3 1202 aaKnown RBP14.36□□□□□ -0.11
TOP3A-205ENST00000477508 ZNF507Q8TCN5 953 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 HELQQ8TDG4 1101 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 LPPQ93052 612 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 PLVAPQ9BX97 442 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 SEMA6BQ9H3T3 888 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 TOPORSQ9NS56 1045 aaPredicted RBP14.36□□□□□ -0.11
TOP3A-205ENST00000477508 RMND1Q9NWS8 449 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 ANKFY1Q9P2R3 1169 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 USP20Q9Y2K6 914 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 MYO9BQ13459 2157 aa14.36□□□□□ -0.11
TOP3A-205ENST00000477508 ABLIM1O14639 778 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 KLRC4O43908 158 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 MYBP10242 640 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 LAG3P18627 525 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 GATMP50440 423 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 YARSP54577 528 aaKnown RBP14.35□□□□□ -0.11
TOP3A-205ENST00000477508 RNASELQ05823 741 aaKnown RBP14.35□□□□□ -0.11
TOP3A-205ENST00000477508 HSP90AA2PQ14568 343 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-205ENST00000477508 KMT5BQ4FZB7 885 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 SPOUT1Q5T280 376 aaKnown RBP14.35□□□□□ -0.11
TOP3A-205ENST00000477508 EPM2AIP1Q7L775 607 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-205ENST00000477508 ACAP3Q96P50 834 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 GSDMAQ96QA5 445 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 RPS6KC1Q96S38 1066 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 APOL6Q9BWW8 343 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 SNTG2Q9NY99 539 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 CGNQ9P2M7 1197 aaKnown RBP14.35□□□□□ -0.11
TOP3A-205ENST00000477508 PARP2Q9UGN5 583 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 HES2Q9Y543 173 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 PCDHB12Q9Y5F1 795 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 MRPL42Q9Y6G3 142 aaKnown RBP14.35□□□□□ -0.11
TOP3A-205ENST00000477508 STYXL1Q9Y6J8 313 aa14.35□□□□□ -0.11
TOP3A-205ENST00000477508 A0A0B4J269 797 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 ARL5CA6NH57 179 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 MEIS3P2A8K0S8 358 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 KIAA0391O15091 583 aaKnown RBP14.34□□□□□ -0.11
TOP3A-205ENST00000477508 OGTO15294 1046 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 RECQL4O94761 1208 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 RHOBTB3O94955 611 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 CLTAP09496 248 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 BMPR1AP36894 532 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 CASP5P51878 434 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 POU5F1Q01860 360 aaKnown RBP14.34□□□□□ -0.11
TOP3A-205ENST00000477508 BMT2Q1RMZ1 405 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 ZBTB33Q86T24 672 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 TMEM192Q8IY95 271 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 DEFB123Q8N688 67 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms