RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	LDAH	Q9H6V9	325 aa		4.38	□□□□□ -1.71
TARDBP-208	ENST00000477447	RAPGEFL1	Q9UHV5	662 aa		4.38	□□□□□ -1.71
TARDBP-208	ENST00000477447	ANKRD6	Q9Y2G4	727 aa		4.38	□□□□□ -1.71
TARDBP-208	ENST00000477447	SLC30A1	Q9Y6M5	507 aa		4.38	□□□□□ -1.71
TARDBP-208	ENST00000477447		K7ESM1	405 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	HTRA2	O43464	458 aa	Predicted RBP	4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	GAST	P01350	101 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	PTPN7	P35236	360 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	SREBF1	P36956	1147 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	GZMK	P49863	264 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	NFE2	Q16621	373 aa	Predicted RBP	4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	FAM111B	Q6SJ93	734 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	POLN	Q7Z5Q5	900 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	RHOT1	Q8IXI2	618 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	TRMT2A	Q8IZ69	625 aa	Known RBP	4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	D2HGDH	Q8N465	521 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.37	□□□□□ -1.71	3e-13	■□□□□ 8.3
TARDBP-208	ENST00000477447	CXorf38	Q8TB03	319 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	KAT5	Q92993	513 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	RAB24	Q969Q5	203 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	LOXL4	Q96JB6	756 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	ENKD1	Q9H0I2	346 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	BCO1	Q9HAY6	547 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	TCF7L1	Q9HCS4	588 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	LANCL2	Q9NS86	450 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	PLA2G3	Q9NZ20	509 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	NOB1	Q9ULX3	412 aa	Known RBP	4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	LIMCH1	Q9UPQ0	1083 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	IPP	Q9Y573	584 aa		4.37	□□□□□ -1.71
TARDBP-208	ENST00000477447	DTNB	O60941	627 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	VCAM1	P19320	739 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	EDNRB	P24530	442 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	WAS	P42768	502 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	SLC6A9	P48067	706 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	APBA1	Q02410	837 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	FOXL1	Q12952	345 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	IL10RA	Q13651	578 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	ICAM4	Q14773	271 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	RRP12	Q5JTH9	1297 aa	Known RBP	4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	FKBP15	Q5T1M5	1219 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	PDZD4	Q76G19	769 aa	Predicted RBP	4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	CATIP	Q7Z7H3	387 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	TPH2	Q8IWU9	490 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	CHPF	Q8IZ52	775 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	MB21D1	Q8N884	522 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	CCHCR1	Q8TD31	782 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	RELT	Q969Z4	430 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	ZNF512	Q96ME7	567 aa	Predicted RBP	4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	NUP88	Q99567	741 aa	Predicted RBP	4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	MANSC1	Q9H8J5	431 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	ST6GALNAC2	Q9UJ37	374 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	SIK3	Q9Y2K2	1263 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	SH3BP1	Q9Y3L3	701 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	PCDHA13	Q9Y5I0	950 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	ZMYM3	Q14202	1370 aa		4.36	□□□□□ -1.71
TARDBP-208	ENST00000477447	PATE3	B3GLJ2	98 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	TSPAN6	O43657	245 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	GPR32	O75388	356 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	HMGB1	P09429	215 aa	Known RBP	4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	SYN1	P17600	705 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	GNAT2	P19087	354 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	COMT	P21964	271 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	HHEX	Q03014	270 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	MRPL49	Q13405	166 aa	Known RBP	4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	ELAVL1	Q15717	326 aa	Known RBP	4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	MFSD14B	Q5SR56	506 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	IFIT1B	Q5T764	474 aa	Known RBP	4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	MFSD5	Q6N075	450 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	RSPH3	Q86UC2	560 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447		Q8TCH9	128 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	CEP95	Q96GE4	821 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	TMX3	Q96JJ7	454 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	LRGUK	Q96M69	825 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	CAMKK2	Q96RR4	588 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	GTPBP4	Q9BZE4	634 aa	Known RBP	4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	TDP1	Q9NUW8	608 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	TMEM140	Q9NV12	185 aa		4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.35	□□□□□ -1.71
TARDBP-208	ENST00000477447	CAPN14	A8MX76	684 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	HOXA3	O43365	443 aa	Predicted RBP	4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	FOXD2	O60548	495 aa	Predicted RBP	4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	ZNF623	O75123	536 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	RFPL1	O75677	317 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	IPO13	O94829	963 aa	Known RBP	4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	RAP2A	P10114	183 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	ACO1	P21399	889 aa	Known RBP	4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	FPR1	P21462	350 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	AKAP5	P24588	427 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	CYP2C19	P33261	490 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	ALDH1A3	P47895	512 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	FLT3LG	P49771	235 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.34	□□□□□ -1.71	1e-13	■■■■■ 26.9
TARDBP-208	ENST00000477447	HS1BP3	Q53T59	392 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	PPP4R3A	Q6IN85	833 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	ZNF585A	Q6P3V2	769 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	LILRA6	Q6PI73	481 aa		4.34	□□□□□ -1.71
TARDBP-208	ENST00000477447	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.34	□□□□□ -1.71

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