RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 CWH43Q9H720 699 aa12.8□□□□□ -0.36
LSM2-212ENST00000477182 ZSWIM4Q9H7M6 989 aa12.8□□□□□ -0.36
LSM2-212ENST00000477182 CDV3Q9UKY7 258 aaKnown RBP12.8□□□□□ -0.36
LSM2-212ENST00000477182 EVPLQ92817 2033 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 DENND4AQ7Z401 1863 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 DENND3A2RUS2 1198 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 E9PMD0 336 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 ZBTB39O15060 712 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 ZNF202O95125 648 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 WEE2P0C1S8 567 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 MUTP22033 750 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 MARK3P27448 753 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 STAT5BP51692 787 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 PRKCEQ02156 737 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 NFX1Q12986 1120 aaKnown RBP12.79□□□□□ -0.36
LSM2-212ENST00000477182 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
LSM2-212ENST00000477182 E2F4Q16254 413 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 FAM102BQ5T8I3 360 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 TRMT1LQ7Z2T5 733 aaKnown RBP12.79□□□□□ -0.36
LSM2-212ENST00000477182 C4orf19Q8IY42 314 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 CKAP2LQ8IYA6 745 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 NME8Q8N427 588 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 SUMF1Q8NBK3 374 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 PIGOQ8TEQ8 1089 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 SECISBP2LQ93073 1101 aaKnown RBP12.79□□□□□ -0.36
LSM2-212ENST00000477182 ZNF558Q96NG5 402 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 RTKNQ9BST9 563 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 NT5C3AQ9H0P0 336 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 TMX1Q9H3N1 280 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 SMARCAD1Q9H4L7 1026 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 KCNK12Q9HB15 430 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 ATP6V0A4Q9HBG4 840 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 RGS18Q9NS28 235 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 DACT1Q9NYF0 836 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 IGSF9Q9P2J2 1179 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 NCDNQ9UBB6 729 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 SERTAD1Q9UHV2 236 aa12.79□□□□□ -0.36
LSM2-212ENST00000477182 MAFBQ9Y5Q3 323 aaPredicted RBP12.79□□□□□ -0.36
LSM2-212ENST00000477182 TMEM150BA6NC51 233 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 C2orf71A6NGG8 1288 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 ACTN4O43707 911 aaKnown RBP12.78□□□□□ -0.36
LSM2-212ENST00000477182 DKC1O60832 514 aaKnown RBP eCLIP12.78□□□□□ -0.36
LSM2-212ENST00000477182 CLASP2O75122 1294 aaKnown RBP12.78□□□□□ -0.36
LSM2-212ENST00000477182 STBD1O95210 358 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 LYPLA2O95372 231 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 MBD3O95983 291 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 ADRB1P08588 477 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 ATP4AP20648 1035 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 IGBP1P78318 339 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 LMNB2Q03252 620 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 LONRF3Q496Y0 759 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 VARS2Q5ST30 1063 aaKnown RBP12.78□□□□□ -0.36
LSM2-212ENST00000477182 KCNT2Q6UVM3 1135 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 CCDC149Q6ZUS6 474 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 PLPPR4Q7Z2D5 763 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 C1orf210Q8IVY1 113 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 IQUBQ8NA54 791 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 RAD54LQ92698 747 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 NACC1Q96RE7 527 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 PYM1Q9BRP8 204 aaKnown RBP12.78□□□□□ -0.36
LSM2-212ENST00000477182 BLOC1S4Q9NUP1 217 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 TMEM161AQ9NX61 479 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 SPG21Q9NZD8 308 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 STK17AQ9UEE5 414 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 USP24Q9UPU5 2620 aa12.78□□□□□ -0.36
LSM2-212ENST00000477182 C9IYK1 514 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 HOXA2O43364 376 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 OATP04181 439 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 SSBP05455 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
LSM2-212ENST00000477182 YWHABP31946 246 aaKnown RBP12.77□□□□□ -0.37
LSM2-212ENST00000477182 TMEM62Q0P6H9 643 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 DHX8Q14562 1220 aaKnown RBP12.77□□□□□ -0.37
LSM2-212ENST00000477182 MCM6Q14566 821 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 PLCB4Q15147 1175 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 XKR3Q5GH77 459 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 PLA2G4FQ68DD2 849 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 KRBA2Q6ZNG9 492 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 CEP57L1Q8IYX8 460 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 ADAM2Q99965 735 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 TMEM117Q9H0C3 514 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 ELAC1Q9H777 363 aaKnown RBP12.77□□□□□ -0.37
LSM2-212ENST00000477182 HCSTQ9UBK5 93 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 SEPT9Q9UHD8 586 aaPredicted RBP12.77□□□□□ -0.37
LSM2-212ENST00000477182 USP25Q9UHP3 1055 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 PCDHA2Q9Y5H9 948 aa12.77□□□□□ -0.37
LSM2-212ENST00000477182 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.76□□□□□ -0.37
LSM2-212ENST00000477182 SPTLC1O15269 473 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 RPS6KA5O75582 802 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 SLFN14P0C7P3 912 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 INSRRP14616 1297 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 CA8P35219 290 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 SLC26A2P50443 739 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 NPEPPSP55786 919 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 COL9A2Q14055 689 aaPredicted RBP12.76□□□□□ -0.37
LSM2-212ENST00000477182 GIT2Q14161 759 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 PHLDB3Q6NSJ2 640 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 ANO5Q75V66 913 aa12.76□□□□□ -0.37
LSM2-212ENST00000477182 GRAMD1CQ8IYS0 662 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms