RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PDZD7Q9H5P4 517 aa11.93□□□□□ -0.5
SEC13-214ENST00000476597 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
SEC13-214ENST00000476597 PARP2Q9UGN5 583 aa11.93□□□□□ -0.5
SEC13-214ENST00000476597 DNM3Q9UQ16 869 aa11.93□□□□□ -0.5
SEC13-214ENST00000476597 PRG3Q9Y2Y8 225 aaPredicted RBP11.93□□□□□ -0.5
SEC13-214ENST00000476597 ARIH1Q9Y4X5 557 aaPredicted RBP11.93□□□□□ -0.5
SEC13-214ENST00000476597 PP2D1A8MPX8 630 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 E9PMD0 336 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 N4BP3O15049 544 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 NR1I2O75469 434 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 EDN1P05305 212 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 SSBP05455 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
SEC13-214ENST00000476597 PRKCBP05771 671 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 CNPP09543 421 aaKnown RBP11.92□□□□□ -0.5
SEC13-214ENST00000476597 KLRC2P26717 231 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 CDC25AP30304 524 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 EFNA5P52803 228 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 ATP2C1P98194 919 aaPredicted RBP11.92□□□□□ -0.5
SEC13-214ENST00000476597 PRPF4BQ13523 1007 aaKnown RBP11.92□□□□□ -0.5
SEC13-214ENST00000476597 KIAA0319Q5VV43 1072 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 CES5AQ6NT32 575 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 C12orf76Q8N812 135 aaPredicted RBP11.92□□□□□ -0.5
SEC13-214ENST00000476597 DEPTORQ8TB45 409 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 EDAQ92838 391 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 IFT74Q96LB3 600 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 NECTIN4Q96NY8 510 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 MMTAG2Q9BU76 263 aaKnown RBP11.92□□□□□ -0.5
SEC13-214ENST00000476597 HERC2P3Q9BVR0 1158 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 COLEC11Q9BWP8 271 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 EMILIN2Q9BXX0 1053 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 MRPL17Q9NRX2 175 aaKnown RBP11.92□□□□□ -0.5
SEC13-214ENST00000476597 CHST7Q9NS84 486 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 DZANK1Q9NVP4 752 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 KLK14Q9P0G3 267 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 SSX2IPQ9Y2D8 614 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 USP20Q9Y2K6 914 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 ZMYM2Q9UBW7 1377 aa11.92□□□□□ -0.5
SEC13-214ENST00000476597 F8W810 466 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 H3BQV1 296 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 MTHFRP42898 656 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 CLCN4P51793 760 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 ZXDAP98168 799 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 GRIK3Q13003 919 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 ATAT1Q5SQI0 421 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 HYIQ5T013 277 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 RARS2Q5T160 578 aaKnown RBP11.91□□□□□ -0.5
SEC13-214ENST00000476597 NT5DC1Q5TFE4 455 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 RINT1Q6NUQ1 792 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 KANK3Q6NY19 840 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 KCNK18Q7Z418 384 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 DAW1Q8N136 415 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 KCTD17Q8N5Z5 321 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 RIPOR3Q96MK2 946 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 RPS6KC1Q96S38 1066 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 RXFP1Q9HBX9 757 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 SNTG2Q9NY99 539 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 CDH22Q9UJ99 828 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 SMC3Q9UQE7 1217 aa11.91□□□□□ -0.5
SEC13-214ENST00000476597 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
SEC13-214ENST00000476597 K7ERI5 159 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 PTGESO14684 152 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 TEX28O15482 410 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 URODP06132 367 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 LIG1P18858 919 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 DSG1Q02413 1049 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 TMEM132AQ24JP5 1023 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 EEF1DP3Q658K8 133 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 LARP1BQ659C4 914 aaKnown RBP11.9□□□□□ -0.5
SEC13-214ENST00000476597 ARL6IP4Q66PJ3 421 aaKnown RBP11.9□□□□□ -0.5
SEC13-214ENST00000476597 TRIM67Q6ZTA4 783 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 C1orf186Q6ZWK4 172 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 CABP7Q86V35 215 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 GPR65Q8IYL9 337 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 FBXL18Q96ME1 805 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 ADPGKQ9BRR6 497 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 KIFC3Q9BVG8 833 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 RUSC1Q9BVN2 902 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 GPR62Q9BZJ7 368 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 POMKQ9H5K3 350 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 HCN4Q9Y3Q4 1203 aa11.9□□□□□ -0.5
SEC13-214ENST00000476597 C2CD2LO14523 706 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 HIP1RO75146 1068 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 C1RP00736 705 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 THP07101 528 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 WEE2P0C1S8 567 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 NPTX2P47972 431 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 GLUD2P49448 558 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 PEX3P56589 373 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 MAPK7Q13164 816 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 TUSC3Q13454 348 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 NAB2Q15742 525 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 USP41Q3LFD5 358 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 DCAF4L1Q3SXM0 396 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 ATF7IP2Q5U623 682 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 KIAA1841Q6NSI8 718 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 FUT10Q6P4F1 479 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 TMC5Q6UXY8 1006 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 HFE2Q6ZVN8 426 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 BMP8AQ7Z5Y6 402 aa11.89□□□□□ -0.51
SEC13-214ENST00000476597 GPR149Q86SP6 731 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms