RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 FIBCD1Q8N539 461 aa32.38■■■□□ 2.77
HOXB3-208ENST00000476342 HELQQ8TDG4 1101 aa32.38■■■□□ 2.77
HOXB3-208ENST00000476342 HPS3Q969F9 1004 aa32.38■■■□□ 2.77
HOXB3-208ENST00000476342 RNF19AQ9NV58 838 aa32.38■■■□□ 2.77
HOXB3-208ENST00000476342 HES2Q9Y543 173 aa32.38■■■□□ 2.77
HOXB3-208ENST00000476342 EIF3DO15371 548 aaKnown RBP eCLIP32.37■■■□□ 2.77
HOXB3-208ENST00000476342 CLDN3O15551 220 aa32.37■■■□□ 2.77
HOXB3-208ENST00000476342 MCF2P10911 925 aa32.37■■■□□ 2.77
HOXB3-208ENST00000476342 GATMP50440 423 aa32.37■■■□□ 2.77
HOXB3-208ENST00000476342 PSMD2Q13200 908 aa32.37■■■□□ 2.77
HOXB3-208ENST00000476342 NOLC1Q14978 699 aaKnown RBP eCLIP32.37■■■□□ 2.77
HOXB3-208ENST00000476342 AGMOQ6ZNB7 445 aa32.37■■■□□ 2.77
HOXB3-208ENST00000476342 ELOA2Q8IYF1 753 aaPredicted RBP32.37■■■□□ 2.77
HOXB3-208ENST00000476342 APOL6Q9BWW8 343 aa32.37■■■□□ 2.77
HOXB3-208ENST00000476342 FGFBP2Q9BYJ0 223 aa32.37■■■□□ 2.77
HOXB3-208ENST00000476342 CDT1Q9H211 546 aa32.37■■■□□ 2.77
HOXB3-208ENST00000476342 TMEM206Q9H813 350 aa32.37■■■□□ 2.77
HOXB3-208ENST00000476342 MATR3P43243 847 aaKnown RBP eCLIP32.36■■■□□ 2.772e-7■■□□□ 14.4
HOXB3-208ENST00000476342 ZNF697Q5TEC3 545 aa32.36■■■□□ 2.77
HOXB3-208ENST00000476342 ZBTB33Q86T24 672 aa32.36■■■□□ 2.77
HOXB3-208ENST00000476342 CASD1Q96PB1 797 aa32.36■■■□□ 2.77
HOXB3-208ENST00000476342 MRPL9Q9BYD2 267 aaKnown RBP32.36■■■□□ 2.77
HOXB3-208ENST00000476342 LINC01553A4QN01 128 aa32.35■■■□□ 2.77
HOXB3-208ENST00000476342 MEIS3P2A8K0S8 358 aa32.35■■■□□ 2.77
HOXB3-208ENST00000476342 PNOCQ13519 176 aa32.35■■■□□ 2.77
HOXB3-208ENST00000476342 SYCP3Q8IZU3 236 aa32.35■■■□□ 2.77
HOXB3-208ENST00000476342 ZBTB45Q96K62 511 aaPredicted RBP32.35■■■□□ 2.77
HOXB3-208ENST00000476342 LMBRD1Q9NUN5 540 aa32.35■■■□□ 2.77
HOXB3-208ENST00000476342 GIT1Q9Y2X7 761 aa32.35■■■□□ 2.77
HOXB3-208ENST00000476342 UBE4BO95155 1302 aa32.35■■■□□ 2.77
HOXB3-208ENST00000476342 ABLIM1O14639 778 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 PRPF6O94906 941 aaKnown RBP32.34■■■□□ 2.77
HOXB3-208ENST00000476342 TAP1Q03518 808 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 MCL1Q07820 350 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 LRRC43Q8N309 656 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 RNF39Q9H2S5 420 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 ZNF576Q9H609 170 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 SLC39A2Q9NP94 309 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 PARP2Q9UGN5 583 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 ZMYM2Q9UBW7 1377 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 OFD1O75665 1012 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 RHOBTB3O94955 611 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 SMC2O95347 1197 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 HARSP12081 509 aaKnown RBP32.34■■■□□ 2.77
HOXB3-208ENST00000476342 KCNA1Q09470 495 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 KCNB1Q14721 858 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 EPM2AIP1Q7L775 607 aaPredicted RBP32.34■■■□□ 2.77
HOXB3-208ENST00000476342 GLIS3Q8NEA6 775 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 URGCPQ8TCY9 931 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 SNTG2Q9NY99 539 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 INPP5FQ9Y2H2 1132 aa32.34■■■□□ 2.77
HOXB3-208ENST00000476342 RALGAPA2Q2PPJ7 1873 aa32.33■■■□□ 2.77
HOXB3-208ENST00000476342 NLRC5Q86WI3 1866 aa32.33■■■□□ 2.77
HOXB3-208ENST00000476342 AKAP5P24588 427 aa32.33■■■□□ 2.77
HOXB3-208ENST00000476342 GRM5P41594 1212 aa32.33■■■□□ 2.77
HOXB3-208ENST00000476342 NOMO2Q5JPE7 1267 aa32.33■■■□□ 2.77
HOXB3-208ENST00000476342 SLFN12LQ6IEE8 588 aa32.33■■■□□ 2.77
HOXB3-208ENST00000476342 ZNF507Q8TCN5 953 aa32.33■■■□□ 2.77
HOXB3-208ENST00000476342 TGS1Q96RS0 853 aaKnown RBP32.33■■■□□ 2.77
HOXB3-208ENST00000476342 CCDC94Q9BW85 323 aaPredicted RBP32.33■■■□□ 2.77
HOXB3-208ENST00000476342 RWDD3Q9Y3V2 267 aa32.33■■■□□ 2.77
HOXB3-208ENST00000476342 ARHGEF15O94989 841 aa32.32■■■□□ 2.76
HOXB3-208ENST00000476342 SAMD11Q96NU1 681 aa32.32■■■□□ 2.76
HOXB3-208ENST00000476342 RMND1Q9NWS8 449 aa32.32■■■□□ 2.76
HOXB3-208ENST00000476342 KANSL3Q9P2N6 904 aa32.32■■■□□ 2.76
HOXB3-208ENST00000476342 MRPL42Q9Y6G3 142 aaKnown RBP32.32■■■□□ 2.76
HOXB3-208ENST00000476342 SZT2Q5T011 3432 aa32.31■■■□□ 2.76
HOXB3-208ENST00000476342 MLH1P40692 756 aa32.31■■■□□ 2.76
HOXB3-208ENST00000476342 SLC39A4Q6P5W5 647 aa32.31■■■□□ 2.76
HOXB3-208ENST00000476342 THNSL1Q8IYQ7 743 aa32.31■■■□□ 2.76
HOXB3-208ENST00000476342 CLP1Q92989 425 aaKnown RBP32.31■■■□□ 2.76
HOXB3-208ENST00000476342 SMARCE1Q969G3 411 aa32.31■■■□□ 2.76
HOXB3-208ENST00000476342 GSDMAQ96QA5 445 aa32.31■■■□□ 2.76
HOXB3-208ENST00000476342 GDAQ9Y2T3 454 aa32.31■■■□□ 2.76
HOXB3-208ENST00000476342 ARL5CA6NH57 179 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 RECQL4O94761 1208 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 YARSP54577 528 aaKnown RBP32.3■■■□□ 2.76
HOXB3-208ENST00000476342 STK4Q13043 487 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 KYAT1Q16773 422 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 SPOUT1Q5T280 376 aaKnown RBP32.3■■■□□ 2.76
HOXB3-208ENST00000476342 CEP120Q8N960 986 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 SCFD1Q8WVM8 642 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 RPS6KC1Q96S38 1066 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 GAD1Q99259 594 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 MSTO1Q9BUK6 570 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 TOPORSQ9NS56 1045 aaPredicted RBP32.3■■■□□ 2.76
HOXB3-208ENST00000476342 TYW1Q9NV66 732 aaKnown RBP32.3■■■□□ 2.76
HOXB3-208ENST00000476342 STYXL1Q9Y6J8 313 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 CHD9Q3L8U1 2897 aa32.3■■■□□ 2.76
HOXB3-208ENST00000476342 KIAA1671Q9BY89 1806 aa32.29■■■□□ 2.76
HOXB3-208ENST00000476342 TDRD15B5MCY1 1934 aaKnown RBP32.29■■■□□ 2.76
HOXB3-208ENST00000476342 CITO14578 2027 aa32.29■■■□□ 2.76
HOXB3-208ENST00000476342 ANKRD63C9JTQ0 380 aa32.29■■■□□ 2.76
HOXB3-208ENST00000476342 INPPL1O15357 1258 aa32.29■■■□□ 2.76
HOXB3-208ENST00000476342 RNASELQ05823 741 aaKnown RBP32.29■■■□□ 2.76
HOXB3-208ENST00000476342 BMT2Q1RMZ1 405 aa32.29■■■□□ 2.76
HOXB3-208ENST00000476342 KIAA0895Q8NCT3 520 aa32.29■■■□□ 2.76
HOXB3-208ENST00000476342 TTYH1Q9H313 450 aaPredicted RBP32.29■■■□□ 2.76
HOXB3-208ENST00000476342 A0A0B4J269 797 aa32.28■■■□□ 2.76
HOXB3-208ENST00000476342 KIF20AO95235 890 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms