RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 ASPRV1Q53RT3 343 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 AKNAD1Q5T1N1 836 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 SYDE2Q5VT97 1194 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 CAVIN1Q6NZI2 390 aaKnown RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 MFSD6Q6ZSS7 791 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 CPXCR1Q8N123 301 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 KLHDC9Q8NEP7 349 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 DNERQ8NFT8 737 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 PIWIL2Q8TC59 973 aaKnown RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 MORC4Q8TE76 937 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 GATAD2BQ8WXI9 593 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 TMEM87BQ96K49 555 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 RNPC3Q96LT9 517 aaKnown RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 FGD4Q96M96 766 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 LRRC3Q9BY71 257 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 RAVER2Q9HCJ3 691 aaKnown RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 TOMM22Q9NS69 142 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 HOMER2Q9NSB8 354 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 LMBRD1Q9NUN5 540 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 MTMR10Q9NXD2 777 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 CYP39A1Q9NYL5 469 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 CTNNA3Q9UI47 895 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 TBX21Q9UL17 535 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 TLR6Q9Y2C9 796 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 ZDHHC9Q9Y397 364 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 BAZ2BQ9UIF8 2168 aaKnown RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 SPTBN5Q9NRC6 3674 aaKnown RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 COL4A4P53420 1690 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 COL4A6Q14031 1691 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 SIP14410 1827 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 RALGAPA2Q2PPJ7 1873 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 SMIM22K7EJ46 135 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 ARVCFO00192 962 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 KPNA6O60684 536 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 SNAI1O95863 264 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-206ENST00000476045 RECKO95980 971 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 TIMP1P01033 207 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 PGRP06401 933 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 ASGR1P07306 291 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 SNHG28P0DPA3 235 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 HSPD1P10809 573 aaKnown RBP4.85□□□□□ -1.63
VPS13D-206ENST00000476045 PDHBP11177 359 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 ALAS1P13196 640 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 CHMLP26374 656 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 ALDH5A1P51649 535 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-206ENST00000476045 TAGLNQ01995 201 aaKnown RBP4.85□□□□□ -1.63
VPS13D-206ENST00000476045 TNFAIP2Q03169 654 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 ZNF543Q08ER8 600 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 CAMK2GQ13555 558 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-206ENST00000476045 PPP2R5BQ15173 497 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 RAB30Q15771 203 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 IMMTQ16891 758 aaKnown RBP4.85□□□□□ -1.63
VPS13D-206ENST00000476045 IQSEC1Q6DN90 963 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 CCSAPQ6IQ19 270 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-206ENST00000476045 MFSD5Q6N075 450 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 DGKHQ86XP1 1220 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 FAM126BQ8IXS8 530 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 CCDC144CPQ8IYA2 1237 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 SLFN12Q8IYM2 578 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 TMEM199Q8N511 208 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 SAMD3Q8N6K7 520 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 SLC17A8Q8NDX2 589 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 RIN3Q8TB24 985 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 SCFD2Q8WU76 684 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 PPP1R13LQ8WUF5 828 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 TRIM44Q96DX7 344 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-206ENST00000476045 FAM161BQ96MY7 647 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 TMEM74Q96NL1 305 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 SEC62Q99442 399 aaKnown RBP4.85□□□□□ -1.63
VPS13D-206ENST00000476045 DSCC1Q9BVC3 393 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 KRT23Q9C075 422 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 KATNBL1Q9H079 304 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 AP5M1Q9H0R1 490 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 RIPK3Q9Y572 518 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 ZNF536O15090 1300 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 ABCB11O95342 1321 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 SCN5AQ14524 2016 aa4.85□□□□□ -1.63
VPS13D-206ENST00000476045 PRRC2BQ5JSZ5 2229 aaKnown RBP4.84□□□□□ -1.63
VPS13D-206ENST00000476045 TET1Q8NFU7 2136 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 NLRC5Q86WI3 1866 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 NEDD4P46934 1319 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 TRIM43BA6NCK2 446 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 PARNO95453 639 aaKnown RBP4.84□□□□□ -1.63
VPS13D-206ENST00000476045 FGAP02671 866 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 SUPT20HL2P0C7V6 817 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 SRFP11831 508 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 EDNRBP24530 442 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 RFC2P35250 354 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 NASPP49321 788 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-206ENST00000476045 NMIQ13287 307 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-206ENST00000476045 IKZF1Q13422 519 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 PWP1Q13610 501 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 SART3Q15020 963 aaKnown RBP4.84□□□□□ -1.63
VPS13D-206ENST00000476045 KCNA10Q16322 511 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 KLHL40Q2TBA0 621 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 DUSP28Q4G0W2 176 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 PRAMEF19Q5SWL8 479 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 ANO1Q5XXA6 986 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 NSMFQ6X4W1 530 aa4.84□□□□□ -1.63
VPS13D-206ENST00000476045 BNC2Q6ZN30 1099 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms