RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PLEKHG4BQ96PX9 1271 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 SLC2A13Q96QE2 648 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 BRINP2Q9C0B6 783 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 CCDC8Q9H0W5 538 aaPredicted RBP8.63□□□□□ -1.03
SMC5-203ENST00000475540 VPS11Q9H270 941 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 PARPBPQ9NWS1 579 aa8.63□□□□□ -1.03
SMC5-203ENST00000475540 WASHC2CQ9Y4E1 1318 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 MYBL2P10244 700 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 HK1P19367 917 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 PTPN7P35236 360 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 IARSP41252 1262 aaKnown RBP8.62□□□□□ -1.03
SMC5-203ENST00000475540 MCAMP43121 646 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 RABGGTBP53611 331 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 NOMO1Q15155 1222 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 MST1LQ2TV78 715 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 DCAF17Q5H9S7 520 aaPredicted RBP8.62□□□□□ -1.03
SMC5-203ENST00000475540 METTL24Q5JXM2 366 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 LCE5AQ5TCM9 118 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 DOK3Q7L591 496 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 CBARPQ8N350 705 aaPredicted RBP8.62□□□□□ -1.03
SMC5-203ENST00000475540 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMC5-203ENST00000475540 PGBD4Q96DM1 585 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 UHRF1Q96T88 793 aaPredicted RBP8.62□□□□□ -1.03
SMC5-203ENST00000475540 ZNF341Q9BYN7 854 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 CSRNP2Q9H175 543 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 ZNF703Q9H7S9 590 aaPredicted RBP8.62□□□□□ -1.03
SMC5-203ENST00000475540 BCO1Q9HAY6 547 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 ZNF277Q9NRM2 450 aaPredicted RBP8.62□□□□□ -1.03
SMC5-203ENST00000475540 TRPS1Q9UHF7 1281 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 CLCA2Q9UQC9 943 aa8.62□□□□□ -1.03
SMC5-203ENST00000475540 PRR5-ARHGAP8B1AHC4 643 aa8.61□□□□□ -1.03
SMC5-203ENST00000475540 MT-CO1P00395 513 aa8.61□□□□□ -1.03
SMC5-203ENST00000475540 OR7D4Q8NG98 312 aa8.61□□□□□ -1.03
SMC5-203ENST00000475540 ZNF747Q9BV97 191 aa8.61□□□□□ -1.03
SMC5-203ENST00000475540 DMRT3Q9NQL9 472 aa8.61□□□□□ -1.03
SMC5-203ENST00000475540 DNM3Q9UQ16 869 aa8.61□□□□□ -1.03
SMC5-203ENST00000475540 MRFAP1Q9Y605 127 aa8.61□□□□□ -1.03
SMC5-203ENST00000475540 SHTN1A0MZ66 631 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 KLHL33A6NCF5 533 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 PPP3CAQ08209 521 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 ACAP2Q15057 778 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 MIIPQ5JXC2 388 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 PRAMEF14Q5SWL7 426 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 Q6ZVL8 140 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 XYLT1Q86Y38 959 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 PPM1NQ8N819 430 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 ZNF503Q96F45 646 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 LSM14BQ9BX40 385 aaKnown RBP8.6□□□□□ -1.03
SMC5-203ENST00000475540 SPON1Q9HCB6 807 aa8.6□□□□□ -1.03
SMC5-203ENST00000475540 NOP58Q9Y2X3 529 aaKnown RBP8.6□□□□□ -1.03
SMC5-203ENST00000475540 KLRG2A4D1S0 409 aaPredicted RBP8.59□□□□□ -1.03
SMC5-203ENST00000475540 B5MCH6 92 aa8.59□□□□□ -1.03
SMC5-203ENST00000475540 RBP3P10745 1247 aa8.59□□□□□ -1.03
SMC5-203ENST00000475540 ABCB5Q2M3G0 1257 aa8.59□□□□□ -1.03
SMC5-203ENST00000475540 FAM47AQ5JRC9 791 aa8.59□□□□□ -1.03
SMC5-203ENST00000475540 NAIF1Q69YI7 327 aaPredicted RBP8.59□□□□□ -1.03
SMC5-203ENST00000475540 HTR3DQ70Z44 454 aa8.59□□□□□ -1.03
SMC5-203ENST00000475540 PQLC1Q8N2U9 271 aa8.59□□□□□ -1.03
SMC5-203ENST00000475540 FUBP3Q96I24 572 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMC5-203ENST00000475540 HOMER2Q9NSB8 354 aa8.59□□□□□ -1.03
SMC5-203ENST00000475540 GABRDO14764 452 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 ADCY6O43306 1168 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 ENDOD1O94919 500 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 C1SP09871 688 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 FLT3LGP49771 235 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 ZXDAP98168 799 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 PTH1RQ03431 593 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 VPS72Q15906 364 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 C1QL3Q5VWW1 255 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 REPS2Q8NFH8 660 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 OR52N2Q8NGI0 321 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 CEP72Q9P209 647 aa8.58□□□□□ -1.04
SMC5-203ENST00000475540 TBKBP1A7MCY6 615 aa8.57□□□□□ -1.04
SMC5-203ENST00000475540 FAM171A2A8MVW0 826 aa8.57□□□□□ -1.04
SMC5-203ENST00000475540 XPOTO43592 962 aaKnown RBP8.57□□□□□ -1.04
SMC5-203ENST00000475540 MGAT2Q10469 447 aa8.57□□□□□ -1.04
SMC5-203ENST00000475540 LSM12Q3MHD2 195 aaKnown RBP8.57□□□□□ -1.04
SMC5-203ENST00000475540 CRIP3Q6Q6R5 217 aa8.57□□□□□ -1.04
SMC5-203ENST00000475540 GPRIN1Q7Z2K8 1008 aa8.57□□□□□ -1.04
SMC5-203ENST00000475540 PNMA8AQ86V59 439 aaPredicted RBP8.57□□□□□ -1.04
SMC5-203ENST00000475540 TRMT2AQ8IZ69 625 aaKnown RBP8.57□□□□□ -1.04
SMC5-203ENST00000475540 JADE3Q92613 823 aa8.57□□□□□ -1.04
SMC5-203ENST00000475540 CEP95Q96GE4 821 aa8.57□□□□□ -1.04
SMC5-203ENST00000475540 GPATCH3Q96I76 525 aa8.57□□□□□ -1.04
SMC5-203ENST00000475540 SAP30BPQ9UHR5 308 aaKnown RBP8.57□□□□□ -1.04
SMC5-203ENST00000475540 RECQL4O94761 1208 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 C6P13671 934 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 TACR2P21452 398 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 CCND1P24385 295 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 SREBF1P36956 1147 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 DGCR2P98153 550 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 RABL3Q5HYI8 236 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 MFSD14BQ5SR56 506 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 ANKS6Q68DC2 871 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 EFCAB12Q6NXP0 572 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 ZNF572Q7Z3I7 529 aaPredicted RBP8.56□□□□□ -1.04
SMC5-203ENST00000475540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMC5-203ENST00000475540 CYFIP2Q96F07 1278 aa8.56□□□□□ -1.04
SMC5-203ENST00000475540 CPEB1Q9BZB8 566 aaKnown RBP8.56□□□□□ -1.04
SMC5-203ENST00000475540 SENP6Q9GZR1 1112 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms