RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NCBP1Q09161 790 aaKnown RBP15.58■□□□□ 0.08
CCDC78-209ENST00000474647 TFDP1Q14186 410 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 SPECC1Q5M775 1068 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 KIAA0319Q5VV43 1072 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 PPP4R3AQ6IN85 833 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 TPH2Q8IWU9 490 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 FAM177A1Q8N128 213 aaPredicted RBP15.58■□□□□ 0.08
CCDC78-209ENST00000474647 KCNG4Q8TDN1 519 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 HAS1Q92839 578 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 CCDC43Q96MW1 224 aaKnown RBP15.58■□□□□ 0.08
CCDC78-209ENST00000474647 MYADMQ96S97 322 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 CSRNP2Q9H175 543 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 NXF3Q9H4D5 531 aaKnown RBP15.58■□□□□ 0.08
CCDC78-209ENST00000474647 NOTCH4Q99466 2003 aa15.58■□□□□ 0.08
CCDC78-209ENST00000474647 MYH11P35749 1972 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 KRBA1A5PL33 1030 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 XBP1P17861 261 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 ID4P47928 161 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 PTENP60484 403 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 DSG1Q02413 1049 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 DSC1Q08554 894 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 MXD4Q14582 209 aaPredicted RBP15.57■□□□□ 0.08
CCDC78-209ENST00000474647 CDR2LQ86X02 465 aaPredicted RBP15.57■□□□□ 0.08
CCDC78-209ENST00000474647 HACE1Q8IYU2 909 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 RNF168Q8IYW5 571 aaPredicted RBP15.57■□□□□ 0.08
CCDC78-209ENST00000474647 ST13P5Q8NFI4 369 aaPredicted RBP15.57■□□□□ 0.08
CCDC78-209ENST00000474647 OXER1Q8TDS5 423 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 RIN2Q8WYP3 895 aaPredicted RBP15.57■□□□□ 0.08
CCDC78-209ENST00000474647 RABGGTAQ92696 567 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 CCDC51Q96ER9 411 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 NAP1L4Q99733 375 aaKnown RBP15.57■□□□□ 0.08
CCDC78-209ENST00000474647 COLEC11Q9BWP8 271 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 ZSWIM4Q9H7M6 989 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 TBC1D17Q9HA65 648 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 RXFP1Q9HBX9 757 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 XPNPEP1Q9NQW7 623 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 GJB4Q9NTQ9 266 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 MIOSQ9NXC5 875 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 WNT16Q9UBV4 365 aa15.57■□□□□ 0.08
CCDC78-209ENST00000474647 PDCD11Q14690 1871 aaKnown RBP15.57■□□□□ 0.08
CCDC78-209ENST00000474647 TBX3O15119 743 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 TGM5O43548 720 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 CDKL5O76039 1030 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 BAG4O95429 457 aaKnown RBP15.56■□□□□ 0.08
CCDC78-209ENST00000474647 NPTXRO95502 500 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 SRFP11831 508 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 RPL17P18621 184 aaKnown RBP15.56■□□□□ 0.08
CCDC78-209ENST00000474647 AKAP5P24588 427 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 MBTD1Q05BQ5 628 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 CAPSQ13938 189 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 FUT10Q6P4F1 479 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 CYP26C1Q6V0L0 522 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 SLC44A3Q8N4M1 653 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 GPR152Q8TDT2 470 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 ZNF707Q96C28 371 aaPredicted RBP15.56■□□□□ 0.08
CCDC78-209ENST00000474647 PDRG1Q9NUG6 133 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 KLK14Q9P0G3 267 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 EPS15L1Q9UBC2 864 aa15.56■□□□□ 0.08
CCDC78-209ENST00000474647 FAM205CA6NFA0 338 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 B4GALT5O43286 388 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 EFEMP2O95967 443 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 ARF4P18085 180 aaPredicted RBP15.55■□□□□ 0.08
CCDC78-209ENST00000474647 SPIRE1Q08AE8 756 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 SCRN1Q12765 414 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 PCBP1Q15365 356 aaKnown RBP eCLIP15.55■□□□□ 0.08
CCDC78-209ENST00000474647 USP41Q3LFD5 358 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 SLFN12Q8IYM2 578 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 ASAP3Q8TDY4 903 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 GPR62Q9BZJ7 368 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 PLEKHA4Q9H4M7 779 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.55■□□□□ 0.08
CCDC78-209ENST00000474647 CACNG4Q9UBN1 327 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 PARP2Q9UGN5 583 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 ADAM28Q9UKQ2 775 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 GIT1Q9Y2X7 761 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 R4GN57 208 aa15.55■□□□□ 0.08
CCDC78-209ENST00000474647 EP300Q09472 2414 aaPredicted RBP15.55■□□□□ 0.08
CCDC78-209ENST00000474647 DNAH14Q0VDD8 3507 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 STK36Q9NRP7 1315 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 DCNP07585 359 aaKnown RBP15.54■□□□□ 0.08
CCDC78-209ENST00000474647 GRIK3Q13003 919 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 EARS2Q5JPH6 523 aaKnown RBP15.54■□□□□ 0.08
CCDC78-209ENST00000474647 SLC27A1Q6PCB7 646 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 PRSS55Q6UWB4 352 aaPredicted RBP15.54■□□□□ 0.08
CCDC78-209ENST00000474647 HASPINQ8TF76 798 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 HDAC7Q8WUI4 952 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 HINFPQ9BQA5 517 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 EIF2AK1Q9BQI3 630 aaKnown RBP15.54■□□□□ 0.08
CCDC78-209ENST00000474647 RHOBTB2Q9BYZ6 727 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 NT5C3AQ9H0P0 336 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 ARHGEF3Q9NR81 526 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 CHST7Q9NS84 486 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 ZDHHC7Q9NXF8 308 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 NUMBLQ9Y6R0 609 aa15.54■□□□□ 0.08
CCDC78-209ENST00000474647 TICRRQ7Z2Z1 1910 aa15.53■□□□□ 0.08
CCDC78-209ENST00000474647 DGAT1O75907 488 aa15.53■□□□□ 0.08
CCDC78-209ENST00000474647 SLITRK3O94933 977 aa15.53■□□□□ 0.08
CCDC78-209ENST00000474647 LAMP2P13473 410 aa15.53■□□□□ 0.08
CCDC78-209ENST00000474647 CREMQ03060 361 aa15.53■□□□□ 0.08
CCDC78-209ENST00000474647 AMHR2Q16671 573 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms