RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 QPCTQ16769 361 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 GSTA3Q16772 222 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 FYB2Q5VWT5 728 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 CDCA2Q69YH5 1023 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 MIS18BP1Q6P0N0 1132 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 ASRGL1Q7L266 308 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 ZNF804AQ7Z570 1209 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 TBC1D1Q86TI0 1168 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 GPBP1Q86WP2 473 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 LRRC34Q8IZ02 419 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 ENDOVQ8N8Q3 282 aaKnown RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 PPFIBP2Q8ND30 876 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 MICAL1Q8TDZ2 1067 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 JDP2Q8WYK2 163 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 ZBTB9Q96C00 473 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 BICD1Q96G01 975 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 NAF1Q96HR8 494 aaKnown RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 EYA3Q99504 573 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 PLIN2Q99541 437 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 TRAIPQ9BWF2 469 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 AP1M1Q9BXS5 423 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 MMADHCQ9H3L0 296 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 DCLRE1BQ9H816 532 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 RNPEPL1Q9HAU8 725 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 KCNMB3Q9NPA1 279 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 SLC5A4Q9NY91 659 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 GCNT4Q9P109 453 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 CNOT8Q9UFF9 292 aaKnown RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 FETUBQ9UGM5 382 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 ASAP1Q9ULH1 1129 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 NIP7Q9Y221 180 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 LRRC42Q9Y546 428 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 PCDHA2Q9Y5H9 948 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 GJA3Q9Y6H8 435 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 CHD8Q9HCK8 2581 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 MROH7Q68CQ1 1323 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ANKRD33BA6NCL7 494 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 WTIPA6NIX2 430 aaPredicted RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 PDLIM1O00151 329 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ATP2A1O14983 1001 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 MAGEB2O15479 319 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 CAMTA2O94983 1202 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 NR3C1P04150 777 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 RARAP10276 462 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ALAS1P13196 640 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ATP6V1C1P21283 382 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 RPA1P27694 616 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ABCD1P33897 745 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SLC1A1P43005 524 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 GCLCP48506 637 aaPredicted RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 GALCP54803 685 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 PLTPP55058 493 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 GPC5P78333 572 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 MRPS25P82663 173 aaKnown RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 CENPCQ03188 943 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 KLC1Q07866 573 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SLC29A2Q14542 456 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 KPNB1Q14974 876 aaKnown RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 TAF11Q15544 211 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ANKRD20A2Q5SQ80 823 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SH2D4BQ5SQS7 431 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ANKRD20A1Q5TYW2 823 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ANKRD20A3Q5VUR7 823 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 IRGCQ6NXR0 463 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 EPM2AIP1Q7L775 607 aaPredicted RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SLC9A9Q8IVB4 645 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SYT2Q8N9I0 419 aaPredicted RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SLC35G2Q8TBE7 412 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 PIP4K2CQ8TBX8 421 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 RASGRP4Q8TDF6 673 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ZNF483Q8TF39 744 aaPredicted RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ATP8B4Q8TF62 1192 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 U2AF1L4Q8WU68 220 aaKnown RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SCFD1Q8WVM8 642 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 LZICQ8WZA0 190 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ARHGEF2Q92974 986 aaKnown RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SNF8Q96H20 258 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 MBOAT7Q96N66 472 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 IWS1Q96ST2 819 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 TSC22D3Q99576 134 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 PRMT1Q99873 361 aaKnown RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ZSWIM1Q9BR11 485 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 DHX36Q9H2U1 1008 aaKnown RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 AZI2Q9H6S1 392 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 LRRC19Q9H756 370 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SUDS3Q9H7L9 328 aaPredicted RBP8.59□□□□□ -1.03
CCDC93-208ENST00000474546 EHMT1Q9H9B1 1298 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 IL17RBQ9NRM6 502 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 ETAA1Q9NY74 926 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SMARCAL1Q9NZC9 954 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 IL1RAPL1Q9NZN1 696 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SSX2IPQ9Y2D8 614 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 USP20Q9Y2K6 914 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 SUGT1Q9Y2Z0 365 aa8.59□□□□□ -1.03
CCDC93-208ENST00000474546 FRMPD4Q14CM0 1322 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms