RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 PAPLNO95428 1278 aa22.51■■□□□ 1.19
APP-215ENST00000474136 ITGA4P13612 1032 aa22.51■■□□□ 1.19
APP-215ENST00000474136 MLH1P40692 756 aa22.51■■□□□ 1.19
APP-215ENST00000474136 NLRP5P59047 1200 aa22.51■■□□□ 1.19
APP-215ENST00000474136 DSC1Q08554 894 aa22.51■■□□□ 1.19
APP-215ENST00000474136 CUL4AQ13619 759 aa22.51■■□□□ 1.19
APP-215ENST00000474136 ME3Q16798 604 aa22.51■■□□□ 1.19
APP-215ENST00000474136 RSPO4Q2I0M5 234 aaPredicted RBP22.51■■□□□ 1.19
APP-215ENST00000474136 ETNPPLQ8TBG4 499 aa22.51■■□□□ 1.19
APP-215ENST00000474136 HES2Q9Y543 173 aa22.51■■□□□ 1.19
APP-215ENST00000474136 IPPQ9Y573 584 aa22.51■■□□□ 1.19
APP-215ENST00000474136 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.51■■□□□ 1.19
APP-215ENST00000474136 NID2Q14112 1375 aa22.5■■□□□ 1.19
APP-215ENST00000474136 RPL17P18621 184 aaKnown RBP22.5■■□□□ 1.19
APP-215ENST00000474136 SCNN1GP51170 649 aa22.5■■□□□ 1.19
APP-215ENST00000474136 LAMTOR4Q0VGL1 99 aa22.5■■□□□ 1.19
APP-215ENST00000474136 HDAC7Q8WUI4 952 aa22.5■■□□□ 1.19
APP-215ENST00000474136 ZFP42Q96MM3 310 aa22.5■■□□□ 1.19
APP-215ENST00000474136 CNTNAP3BQ96NU0 1288 aa22.5■■□□□ 1.19
APP-215ENST00000474136 RNF26Q9BY78 433 aaPredicted RBP22.5■■□□□ 1.19
APP-215ENST00000474136 CNTNAP3Q9BZ76 1288 aa22.5■■□□□ 1.19
APP-215ENST00000474136 GPR62Q9BZJ7 368 aa22.5■■□□□ 1.19
APP-215ENST00000474136 PRKD2Q9BZL6 878 aa22.5■■□□□ 1.19
APP-215ENST00000474136 PLEKHA4Q9H4M7 779 aa22.5■■□□□ 1.19
APP-215ENST00000474136 CHST7Q9NS84 486 aa22.5■■□□□ 1.19
APP-215ENST00000474136 WRAP73Q9P2S5 460 aaPredicted RBP22.5■■□□□ 1.19
APP-215ENST00000474136 CYP3A7-CYP3A51PA0A087WV96 503 aa22.49■■□□□ 1.19
APP-215ENST00000474136 KRT37O76014 449 aa22.49■■□□□ 1.19
APP-215ENST00000474136 CYP3A7P24462 503 aa22.49■■□□□ 1.19
APP-215ENST00000474136 GPC5P78333 572 aa22.49■■□□□ 1.19
APP-215ENST00000474136 CPLX2Q6PUV4 134 aaKnown RBP22.49■■□□□ 1.19
APP-215ENST00000474136 PSPC1Q8WXF1 523 aaKnown RBP22.49■■□□□ 1.19
APP-215ENST00000474136 SLC7A3Q8WY07 619 aa22.49■■□□□ 1.19
APP-215ENST00000474136 FGF14Q92915 247 aa22.49■■□□□ 1.19
APP-215ENST00000474136 CEP170P1Q96L14 293 aa22.49■■□□□ 1.19
APP-215ENST00000474136 DHX33Q9H6R0 707 aaKnown RBP22.49■■□□□ 1.19
APP-215ENST00000474136 ZDHHC7Q9NXF8 308 aa22.49■■□□□ 1.19
APP-215ENST00000474136 TPRP12270 2363 aaKnown RBP22.49■■□□□ 1.19
APP-215ENST00000474136 COL4A3Q01955 1670 aa22.48■■□□□ 1.19
APP-215ENST00000474136 EPG5Q9HCE0 2579 aa22.48■■□□□ 1.19
APP-215ENST00000474136 STARD6P59095 220 aa22.48■■□□□ 1.19
APP-215ENST00000474136 LILRA6Q6PI73 481 aa22.48■■□□□ 1.19
APP-215ENST00000474136 PARM1Q6UWI2 310 aa22.48■■□□□ 1.19
APP-215ENST00000474136 RNF149Q8NC42 400 aa22.48■■□□□ 1.19
APP-215ENST00000474136 RABGGTAQ92696 567 aa22.48■■□□□ 1.19
APP-215ENST00000474136 GTF3C6Q969F1 213 aa22.48■■□□□ 1.19
APP-215ENST00000474136 CPB2Q96IY4 423 aa22.48■■□□□ 1.19
APP-215ENST00000474136 MBOAT7Q96N66 472 aa22.48■■□□□ 1.19
APP-215ENST00000474136 LARP6Q9BRS8 491 aaKnown RBP22.48■■□□□ 1.19
APP-215ENST00000474136 LLPHQ9BRT6 129 aaKnown RBP22.48■■□□□ 1.19
APP-215ENST00000474136 APOL6Q9BWW8 343 aa22.48■■□□□ 1.19
APP-215ENST00000474136 NCOA5Q9HCD5 579 aaKnown RBP22.48■■□□□ 1.19
APP-215ENST00000474136 UBN1Q9NPG3 1134 aa22.48■■□□□ 1.19
APP-215ENST00000474136 SPTBN2O15020 2390 aa22.47■■□□□ 1.19
APP-215ENST00000474136 KINO60870 393 aaKnown RBP22.47■■□□□ 1.19
APP-215ENST00000474136 QARSP47897 775 aaKnown RBP22.47■■□□□ 1.19
APP-215ENST00000474136 NTHL1P78549 312 aa22.47■■□□□ 1.19
APP-215ENST00000474136 SNW1Q13573 536 aaKnown RBP22.47■■□□□ 1.19
APP-215ENST00000474136 FUT10Q6P4F1 479 aa22.47■■□□□ 1.19
APP-215ENST00000474136 CNNM3Q8NE01 707 aa22.47■■□□□ 1.19
APP-215ENST00000474136 MTF2Q9Y483 593 aaPredicted RBP22.47■■□□□ 1.19
APP-215ENST00000474136 FANCMQ8IYD8 2048 aa22.47■■□□□ 1.19
APP-215ENST00000474136 SLC37A4O43826 429 aa22.46■■□□□ 1.19
APP-215ENST00000474136 TSPAN1O60635 241 aa22.46■■□□□ 1.19
APP-215ENST00000474136 CDKL5O76039 1030 aa22.46■■□□□ 1.19
APP-215ENST00000474136 IFNAR1P17181 557 aa22.46■■□□□ 1.19
APP-215ENST00000474136 FSHRP23945 695 aa22.46■■□□□ 1.19
APP-215ENST00000474136 CCT2P78371 535 aaKnown RBP22.46■■□□□ 1.19
APP-215ENST00000474136 GRASPQ7Z6J2 395 aaPredicted RBP22.46■■□□□ 1.19
APP-215ENST00000474136 COLEC11Q9BWP8 271 aa22.46■■□□□ 1.19
APP-215ENST00000474136 SH3GLB2Q9NR46 395 aa22.46■■□□□ 1.19
APP-215ENST00000474136 SPATA6Q9NWH7 488 aaPredicted RBP22.46■■□□□ 1.19
APP-215ENST00000474136 PCDHA4Q9UN74 947 aa22.46■■□□□ 1.19
APP-215ENST00000474136 CPLX1O14810 134 aa22.45■■□□□ 1.18
APP-215ENST00000474136 ZMYND10O75800 440 aa22.45■■□□□ 1.18
APP-215ENST00000474136 ERLIN2O94905 339 aa22.45■■□□□ 1.18
APP-215ENST00000474136 STK3Q13188 491 aa22.45■■□□□ 1.18
APP-215ENST00000474136 USP41Q3LFD5 358 aa22.45■■□□□ 1.18
APP-215ENST00000474136 PRSS55Q6UWB4 352 aaPredicted RBP22.45■■□□□ 1.18
APP-215ENST00000474136 FERMT3Q86UX7 667 aa22.45■■□□□ 1.18
APP-215ENST00000474136 SHDQ96IW2 340 aa22.45■■□□□ 1.18
APP-215ENST00000474136 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.45■■□□□ 1.18
APP-215ENST00000474136 FNIP2Q9P278 1114 aa22.45■■□□□ 1.18
APP-215ENST00000474136 CACNG4Q9UBN1 327 aa22.45■■□□□ 1.18
APP-215ENST00000474136 DDX25Q9UHL0 483 aaKnown RBP22.45■■□□□ 1.18
APP-215ENST00000474136 VAV3Q9UKW4 847 aa22.45■■□□□ 1.18
APP-215ENST00000474136 KANSL1LA0AUZ9 987 aa22.44■■□□□ 1.18
APP-215ENST00000474136 M0R2N6 131 aa22.44■■□□□ 1.18
APP-215ENST00000474136 NR1I2O75469 434 aa22.44■■□□□ 1.18
APP-215ENST00000474136 RFC5P40937 340 aa22.44■■□□□ 1.18
APP-215ENST00000474136 EMC2Q15006 297 aa22.44■■□□□ 1.18
APP-215ENST00000474136 VARS2Q5ST30 1063 aaKnown RBP22.44■■□□□ 1.18
APP-215ENST00000474136 GSTCDQ8NEC7 633 aa22.44■■□□□ 1.18
APP-215ENST00000474136 NXF3Q9H4D5 531 aaKnown RBP22.44■■□□□ 1.18
APP-215ENST00000474136 NCDNQ9UBB6 729 aa22.44■■□□□ 1.18
APP-215ENST00000474136 DOCK6Q96HP0 2047 aa22.44■■□□□ 1.18
APP-215ENST00000474136 ZBTB39O15060 712 aa22.43■■□□□ 1.18
APP-215ENST00000474136 LAMTOR5O43504 91 aa22.43■■□□□ 1.18
APP-215ENST00000474136 LARGE1O95461 756 aa22.43■■□□□ 1.18
APP-215ENST00000474136 C1RP00736 705 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms