RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 CATSPERZQ9NTU4 200 aa8.8□□□□□ -1
A1CF-209ENST00000473480 SFMBT1Q9UHJ3 866 aa8.8□□□□□ -1
A1CF-209ENST00000473480 CEMIPQ8WUJ3 1361 aa8.8□□□□□ -1
A1CF-209ENST00000473480 PKD1L2Q7Z442 2459 aa8.8□□□□□ -1
A1CF-209ENST00000473480 HOXA5P20719 270 aa8.79□□□□□ -1
A1CF-209ENST00000473480 RPL13P26373 211 aaKnown RBP8.79□□□□□ -1
A1CF-209ENST00000473480 EPHA5P54756 1037 aa8.79□□□□□ -1
A1CF-209ENST00000473480 GRIN1Q05586 938 aa8.79□□□□□ -1
A1CF-209ENST00000473480 FAM47CQ5HY64 1035 aa8.79□□□□□ -1
A1CF-209ENST00000473480 C16orf59Q7L2K0 433 aa8.79□□□□□ -1
A1CF-209ENST00000473480 ZC3H7AQ8IWR0 971 aaKnown RBP8.79□□□□□ -1
A1CF-209ENST00000473480 RBM12BQ8IXT5 1001 aaKnown RBP8.79□□□□□ -1
A1CF-209ENST00000473480 SYT8Q8NBV8 401 aa8.79□□□□□ -1
A1CF-209ENST00000473480 DEFB118Q96PH6 123 aa8.79□□□□□ -1
A1CF-209ENST00000473480 TMEM209Q96SK2 561 aa8.79□□□□□ -1
A1CF-209ENST00000473480 SPATA25Q9BR10 227 aa8.79□□□□□ -1
A1CF-209ENST00000473480 XYLT2Q9H1B5 865 aa8.79□□□□□ -1
A1CF-209ENST00000473480 TTYH1Q9H313 450 aaPredicted RBP8.79□□□□□ -1
A1CF-209ENST00000473480 ABCC4O15439 1325 aa8.79□□□□□ -1
A1CF-209ENST00000473480 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.78□□□□□ -1
A1CF-209ENST00000473480 TLR2O60603 784 aa8.78□□□□□ -1
A1CF-209ENST00000473480 SRGAP2CP0DJJ0 459 aa8.78□□□□□ -1
A1CF-209ENST00000473480 PIP4K2AP48426 406 aaPredicted RBP8.78□□□□□ -1
A1CF-209ENST00000473480 TEFQ10587 303 aa8.78□□□□□ -1
A1CF-209ENST00000473480 ADAM9Q13443 819 aa8.78□□□□□ -1
A1CF-209ENST00000473480 GPR19Q15760 415 aa8.78□□□□□ -1
A1CF-209ENST00000473480 HLFQ16534 295 aa8.78□□□□□ -1
A1CF-209ENST00000473480 CC2D1BQ5T0F9 858 aaKnown RBP8.78□□□□□ -1
A1CF-209ENST00000473480 NLGN4XQ8N0W4 816 aa8.78□□□□□ -1
A1CF-209ENST00000473480 FEZF2Q8TBJ5 459 aa8.78□□□□□ -1
A1CF-209ENST00000473480 DIS3LQ8TF46 1054 aaKnown RBP8.78□□□□□ -1
A1CF-209ENST00000473480 PHACTR3Q96KR7 559 aa8.78□□□□□ -1
A1CF-209ENST00000473480 MAGEB10Q96LZ2 347 aaPredicted RBP8.78□□□□□ -1
A1CF-209ENST00000473480 CLIC6Q96NY7 704 aa8.78□□□□□ -1
A1CF-209ENST00000473480 ZSWIM8A7E2V4 1837 aa8.77□□□□□ -1
A1CF-209ENST00000473480 OTOL1A6NHN0 477 aaPredicted RBP8.77□□□□□ -1.01
A1CF-209ENST00000473480 LTFP02788 710 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 PYGMP11217 842 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 FAHP16930 419 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 PSMC4P43686 418 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 NHLH1Q02575 133 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 CRY1Q16526 586 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 PAN2Q504Q3 1202 aaKnown RBP8.77□□□□□ -1.01
A1CF-209ENST00000473480 ARHGAP36Q6ZRI8 547 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 SLC7A14Q8TBB6 771 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 WRNIP1Q96S55 665 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 NCOA5Q9HCD5 579 aaKnown RBP8.77□□□□□ -1.01
A1CF-209ENST00000473480 FZD1Q9UP38 647 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 NUDCQ9Y266 331 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 TELO2Q9Y4R8 837 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 USP16Q9Y5T5 823 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 MYPNQ86TC9 1320 aa8.77□□□□□ -1.01
A1CF-209ENST00000473480 TCRBV5S4A2TA0A5A2 114 aa8.76□□□□□ -1.01
A1CF-209ENST00000473480 SMIM22K7EJ46 135 aa8.76□□□□□ -1.01
A1CF-209ENST00000473480 CYP7B1O75881 506 aa8.76□□□□□ -1.01
A1CF-209ENST00000473480 SNRPA1P09661 255 aaKnown RBP8.76□□□□□ -1.01
A1CF-209ENST00000473480 PDE6AP16499 860 aa8.76□□□□□ -1.01
A1CF-209ENST00000473480 SMAD3P84022 425 aaKnown RBP8.76□□□□□ -1.01
A1CF-209ENST00000473480 EP400NLQ6ZTU2 488 aa8.76□□□□□ -1.01
A1CF-209ENST00000473480 SH3RF2Q8TEC5 729 aa8.76□□□□□ -1.01
A1CF-209ENST00000473480 PPM1EQ8WY54 764 aa8.76□□□□□ -1.01
A1CF-209ENST00000473480 YTHDC1Q96MU7 727 aaKnown RBP8.76□□□□□ -1.01
A1CF-209ENST00000473480 EYA3Q99504 573 aa8.76□□□□□ -1.01
A1CF-209ENST00000473480 LBHD1Q9BQE6 289 aaPredicted RBP8.76□□□□□ -1.01
A1CF-209ENST00000473480 CD244Q9BZW8 370 aa8.76□□□□□ -1.01
A1CF-209ENST00000473480 PRKRIP1Q9H875 184 aaPredicted RBP8.76□□□□□ -1.01
A1CF-209ENST00000473480 SRPK3Q9UPE1 567 aa8.76□□□□□ -1.01
A1CF-209ENST00000473480 DDX60Q8IY21 1712 aaKnown RBP8.76□□□□□ -1.01
A1CF-209ENST00000473480 CCDC66A2RUB6 948 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 CTSWP56202 376 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 TAF7Q15545 349 aaPredicted RBP8.75□□□□□ -1.01
A1CF-209ENST00000473480 PRR31Q5SQ13 230 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 VASNQ6EMK4 673 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 TMC5Q6UXY8 1006 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 OSTM1Q86WC4 334 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 APOBEC3FQ8IUX4 373 aaKnown RBP8.75□□□□□ -1.01
A1CF-209ENST00000473480 ZDHHC14Q8IZN3 488 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 ADAMTS17Q8TE56 1095 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 CFAP53Q96M91 514 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 C11orf49Q9H6J7 331 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 USP40Q9NVE5 1235 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 CBLCQ9ULV8 474 aa8.75□□□□□ -1.01
A1CF-209ENST00000473480 IBTKQ9P2D0 1353 aaPredicted RBP8.74□□□□□ -1.01
A1CF-209ENST00000473480 CCL15-CCL14A0A0B4J2E2 113 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 PLD2O14939 933 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 KCNQ3O43525 872 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 RASGRP1O95267 797 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 DNM2P50570 870 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 GJA9P57773 515 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 CCL15Q16663 113 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 NT5DC1Q5TFE4 455 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 LILRA6Q6PI73 481 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 DDX46Q7L014 1031 aaKnown RBP8.74□□□□□ -1.01
A1CF-209ENST00000473480 BRAPQ7Z569 592 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 FRMD5Q7Z6J6 570 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 ZNF761Q86XN6 746 aaPredicted RBP8.74□□□□□ -1.01
A1CF-209ENST00000473480 ANKRD13AQ8IZ07 590 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 FAM43AQ8N2R8 423 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 BRI3BPQ8WY22 251 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 ZSWIM3Q96MP5 696 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms