RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 JAK2O60674 1132 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 PFKFB2O60825 505 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 GLUD1P00367 558 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 GCFC2P16383 781 aaKnown RBP12.47□□□□□ -0.41
ACTB-209ENST00000473257 GLRA2P23416 452 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 IGFBP6P24592 240 aaPredicted RBP12.47□□□□□ -0.41
ACTB-209ENST00000473257 NTHL1P78549 312 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 PRSS55Q6UWB4 352 aaPredicted RBP12.47□□□□□ -0.41
ACTB-209ENST00000473257 OTUD6AQ7L8S5 288 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 RNF168Q8IYW5 571 aaPredicted RBP12.47□□□□□ -0.41
ACTB-209ENST00000473257 GSTCDQ8NEC7 633 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 TCP11Q8WWU5 503 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 RIN2Q8WYP3 895 aaPredicted RBP12.47□□□□□ -0.41
ACTB-209ENST00000473257 SMG7Q92540 1137 aaKnown RBP12.47□□□□□ -0.41
ACTB-209ENST00000473257 POLR3FQ9H1D9 316 aaPredicted RBP12.47□□□□□ -0.41
ACTB-209ENST00000473257 POLD4Q9HCU8 107 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 KANSL3Q9P2N6 904 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 DUSP12Q9UNI6 340 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 CLUHO75153 1309 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 PROB1E7EW31 1015 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 TGM5O43548 720 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 USO1O60763 962 aaKnown RBP12.46□□□□□ -0.41
ACTB-209ENST00000473257 DKC1O60832 514 aaKnown RBP eCLIP12.46□□□□□ -0.41
ACTB-209ENST00000473257 ADH1AP07327 375 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 AOC1P19801 751 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 ATP2B1P20020 1258 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 ARL2P36404 184 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 NBL1P41271 181 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 TXKP42681 527 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 CLCN5P51795 746 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 DSG1Q02413 1049 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 SPECC1Q5M775 1068 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 NOTUMQ6P988 496 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 GET4Q7L5D6 327 aaPredicted RBP12.46□□□□□ -0.41
ACTB-209ENST00000473257 DTWD2Q8NBA8 298 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 HSD17B14Q9BPX1 270 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 RPP25Q9BUL9 199 aaKnown RBP12.46□□□□□ -0.41
ACTB-209ENST00000473257 TRIM6Q9C030 488 aaPredicted RBP12.46□□□□□ -0.41
ACTB-209ENST00000473257 TMEM60Q9H2L4 133 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 RXFP1Q9HBX9 757 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 WDR6Q9NNW5 1121 aaKnown RBP12.46□□□□□ -0.41
ACTB-209ENST00000473257 PARP2Q9UGN5 583 aa12.46□□□□□ -0.41
ACTB-209ENST00000473257 TDRD15B5MCY1 1934 aaKnown RBP12.45□□□□□ -0.42
ACTB-209ENST00000473257 STK36Q9NRP7 1315 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 CASTOR2A6NHX0 329 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 POTEMA6NI47 508 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 BTBD18B2RXH4 712 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 TBX3O15119 743 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 ASAP2O43150 1006 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 ADAM12O43184 909 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 GAS2O43903 313 aaKnown RBP12.45□□□□□ -0.42
ACTB-209ENST00000473257 LRRN2O75325 713 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 CDKL5O76039 1030 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 EDN1P05305 212 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 DCNP07585 359 aaKnown RBP12.45□□□□□ -0.42
ACTB-209ENST00000473257 LIG1P18858 919 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 KRT2P35908 639 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 GUCY1B3Q02153 619 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 ANGPT1Q15389 498 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 CALCRLQ16602 461 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 RTP2Q5QGT7 225 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 FUT10Q6P4F1 479 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 C15orf39Q6ZRI6 1047 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 CCDC105Q8IYK2 499 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 ADSSL1Q8N142 457 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 SLC44A3Q8N4M1 653 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 CMASQ8NFW8 434 aaPredicted RBP12.45□□□□□ -0.42
ACTB-209ENST00000473257 RSPH1Q8WYR4 309 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 BSNDQ8WZ55 320 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 IRF2BPLQ9H1B7 796 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 TTC12Q9H892 705 aaPredicted RBP12.45□□□□□ -0.42
ACTB-209ENST00000473257 PIDD1Q9HB75 910 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 CHST7Q9NS84 486 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 R4GN57 208 aa12.45□□□□□ -0.42
ACTB-209ENST00000473257 LRRIQ4A6NIV6 560 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 BAG4O95429 457 aaKnown RBP12.44□□□□□ -0.42
ACTB-209ENST00000473257 RARRES1P49788 294 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 TFDP1Q14186 410 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 MXD4Q14582 209 aaPredicted RBP12.44□□□□□ -0.42
ACTB-209ENST00000473257 ME3Q16798 604 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 SLFN12Q8IYM2 578 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 GPR152Q8TDT2 470 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 NKD2Q969F2 451 aaPredicted RBP12.44□□□□□ -0.42
ACTB-209ENST00000473257 COLEC11Q9BWP8 271 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 NT5C3AQ9H0P0 336 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 TBC1D17Q9HA65 648 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 UBN1Q9NPG3 1134 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 PCDHA12Q9UN75 941 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 PPME1Q9Y570 386 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 CEP250Q9BV73 2442 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 CACNA1AO00555 2505 aa12.44□□□□□ -0.42
ACTB-209ENST00000473257 CARNS1A5YM72 827 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 MED24O75448 989 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 TADA2AO75478 443 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 KIF4AO95239 1232 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 SPATA31C1P0DKV0 1188 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 XBP1P17861 261 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 AXLP30530 894 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 NUBP1P53384 320 aa12.43□□□□□ -0.42
ACTB-209ENST00000473257 ST3GAL1Q11201 340 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms