RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 DDX39AO00148 427 aaKnown RBP6.62□□□□□ -1.35
SIK3-208ENST00000472648 MEIS2O14770 477 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 NR1I2O75469 434 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 AKAP3O75969 853 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 ATG7O95352 703 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 TRIM16O95361 564 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 CAVIN2O95810 425 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 POMCP01189 267 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 C8AP07357 584 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 RPL17P18621 184 aaKnown RBP6.62□□□□□ -1.35
SIK3-208ENST00000472648 SFPQP23246 707 aaKnown RBP eCLIP6.62□□□□□ -1.35
SIK3-208ENST00000472648 CCNE1P24864 410 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 GDI1P31150 447 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 HOXA6P31267 233 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 HOXA9P31269 272 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 GPC3P51654 580 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 SCAPQ12770 1279 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 GRM4Q14833 912 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 ELF2Q15723 593 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 USP41Q3LFD5 358 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 MCMDC2Q4G0Z9 681 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 TANGO2Q6ICL3 276 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 MIS18BP1Q6P0N0 1132 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 LILRA6Q6PI73 481 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 C1orf228Q6PIY5 440 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 Q6ZS52 159 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 CCDC60Q8IWA6 550 aaPredicted RBP6.62□□□□□ -1.35
SIK3-208ENST00000472648 RNF168Q8IYW5 571 aaPredicted RBP6.62□□□□□ -1.35
SIK3-208ENST00000472648 LRRC71Q8N4P6 559 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 PI4K2BQ8TCG2 481 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 MCRS1Q96EZ8 462 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 MSANTD3Q96H12 275 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 B3GALT6Q96L58 329 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 MBOAT7Q96N66 472 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 UBL7Q96S82 380 aaPredicted RBP6.62□□□□□ -1.35
SIK3-208ENST00000472648 TRMT61BQ9BVS5 477 aaKnown RBP6.62□□□□□ -1.35
SIK3-208ENST00000472648 TRAIPQ9BWF2 469 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 CCDC86Q9H6F5 360 aaKnown RBP6.62□□□□□ -1.35
SIK3-208ENST00000472648 RSAD1Q9HA92 442 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 SCUBE2Q9NQ36 999 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 RBM12Q9NTZ6 932 aaKnown RBP6.62□□□□□ -1.35
SIK3-208ENST00000472648 HCFC1R1Q9NWW0 138 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 GDE1Q9NZC3 331 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 TCEAL9Q9UHQ7 104 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 FBXW11Q9UKB1 542 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 DDX19BQ9UMR2 479 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 RAI2Q9Y5P3 530 aa6.62□□□□□ -1.35
SIK3-208ENST00000472648 CFAP46Q8IYW2 2715 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 KHNYNO15037 678 aaKnown RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 CYTH3O43739 400 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 ZNF623O75123 536 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 CSDE1O75534 798 aaKnown RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 CAPNS1P04632 268 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 MS4A1P11836 297 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 PXNP49023 591 aaPredicted RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 SIM1P81133 766 aaPredicted RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 DGKKQ5KSL6 1271 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 SWSAP1Q6NVH7 229 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 ABHD15Q6UXT9 468 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 AGMOQ6ZNB7 445 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 GPR65Q8IYL9 337 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 SLC7A14Q8TBB6 771 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 FAM200AQ8TCP9 573 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 CSGALNACT1Q8TDX6 532 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 PIK3R5Q8WYR1 880 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 ZC3H10Q96K80 434 aaKnown RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 FAM227BQ96M60 508 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 HNRNPABQ99729 332 aaKnown RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 MXRA8Q9BRK3 442 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 COLEC11Q9BWP8 271 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 GCOM2Q9BZD3 368 aaPredicted RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 KRT23Q9C075 422 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 CHMP4BQ9H444 224 aaKnown RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 LY9Q9HBG7 655 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 ZFP14Q9HCL3 533 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 ZNF334Q9HCZ1 680 aaPredicted RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 TRPV5Q9NQA5 729 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 CHST7Q9NS84 486 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 ZBTB40Q9NUA8 1239 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 ZSWIM5Q9P217 1185 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 SEC63Q9UGP8 760 aaKnown RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 PCDHB2Q9Y5E7 798 aa6.61□□□□□ -1.35
SIK3-208ENST00000472648 URB1O60287 2271 aaKnown RBP6.61□□□□□ -1.35
SIK3-208ENST00000472648 APC2O95996 2303 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 CACNA1EQ15878 2313 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 ATMQ13315 3056 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 CCDC163A0A0D9SF12 145 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 A0A0D9SFI3 127 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 SPAARA0A1B0GVQ0 90 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 FAM221BA6H8Z2 402 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 J3QKU1 62 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 TK2O00142 265 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 C1QL1O75973 258 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 RHOBTB1O94844 696 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 EFEMP2O95967 443 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 CCNE2O96020 404 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 PSMC3P17980 439 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 ATP4AP20648 1035 aa6.6□□□□□ -1.35
SIK3-208ENST00000472648 AFF1P51825 1210 aaKnown RBP6.6□□□□□ -1.35
SIK3-208ENST00000472648 KPNA1P52294 538 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms