RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 FAM114A2Q9NRY5 505 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 FOXN1O15353 648 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 CLTAP09496 248 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 PPARDQ03181 441 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 SDCCAG8Q86SQ7 713 aaPredicted RBP13.08□□□□□ -0.32
IRF1-208ENST00000472045 CATSPER3Q86XQ3 398 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 HVCN1Q96D96 273 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 IFT43Q96FT9 208 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 PRDM10Q9NQV6 1147 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 DYRK4Q9NR20 520 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 TCRBV5S4A2TA0A5A2 114 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 MYMKA6NI61 221 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 PDGFRBP09619 1106 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 MYBP10242 640 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 ARP10275 920 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 MOXD1Q6UVY6 613 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.32
IRF1-208ENST00000472045 SP110Q9HB58 689 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 CALCOCO1Q9P1Z2 691 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 PCSK1NQ9UHG2 260 aa13.08□□□□□ -0.32
IRF1-208ENST00000472045 CIB2O75838 187 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 DEFB128Q7Z7B8 93 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 ATP6V1E2Q96A05 226 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 PPP1R13BQ96KQ4 1090 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 C17orf75Q9HAS0 396 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 MYPNQ86TC9 1320 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 AK9Q5TCS8 1911 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 ZRANB2O95218 330 aaKnown RBP eCLIP13.07□□□□□ -0.32
IRF1-208ENST00000472045 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 MYBL1P10243 752 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 CA4P22748 312 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 ALDH1A3P47895 512 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 SP3Q02447 781 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 PAN2Q504Q3 1202 aaKnown RBP13.07□□□□□ -0.32
IRF1-208ENST00000472045 CEP85LQ5SZL2 805 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 ZFPM1Q8IX07 1006 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 STKLD1Q8NE28 680 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 CFAP57Q96MR6 1250 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 RILPQ96NA2 401 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 TMEM39AQ9NV64 488 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.07□□□□□ -0.32
IRF1-208ENST00000472045 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 POC1B-GALNT4F8VUJ3 575 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 C2CD2LO14523 706 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 KLRC1P26715 233 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 SOX5P35711 763 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 KIZQ2M2Z5 673 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 ZC2HC1CQ53FD0 456 aaPredicted RBP13.07□□□□□ -0.32
IRF1-208ENST00000472045 MCUQ8NE86 351 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 HDAC11Q96DB2 347 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 FSD1LQ9BXM9 530 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 H3BRB1 525 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 FKTNO75072 461 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 ZNF286BP0CG31 522 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 ANKRD40Q6AI12 368 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 TUT1Q9H6E5 874 aaKnown RBP13.07□□□□□ -0.32
IRF1-208ENST00000472045 IP6K2Q9UHH9 426 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 HEY1Q9Y5J3 304 aa13.07□□□□□ -0.32
IRF1-208ENST00000472045 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 SLC37A4O43826 429 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 LRG1P02750 347 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 TGFB3P10600 412 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 IQCB1Q15051 598 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 TLK2Q86UE8 772 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 PPP1R12CQ9BZL4 782 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 UBQLN1Q9UMX0 589 aaKnown RBP13.06□□□□□ -0.32
IRF1-208ENST00000472045 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 EXTL3O43909 919 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 PNPLA4P41247 253 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 SNRPFP62306 86 aaKnown RBP13.06□□□□□ -0.32
IRF1-208ENST00000472045 TRIP13Q15645 432 aaPredicted RBP13.06□□□□□ -0.32
IRF1-208ENST00000472045 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 NLGN2Q8NFZ4 835 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 NUDCD1Q96RS6 583 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 RNF14Q9UBS8 474 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 FAM198AQ9UFP1 575 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 TACC3Q9Y6A5 838 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 H3BRJ5 948 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 IRF6O14896 467 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 EIF3DO15371 548 aaKnown RBP eCLIP13.06□□□□□ -0.32
IRF1-208ENST00000472045 ADCY3O60266 1144 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 CXCR5P32302 372 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 NXNQ6DKJ4 435 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 CCDC62Q6P9F0 684 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 ZNF564Q8TBZ8 553 aaPredicted RBP13.06□□□□□ -0.32
IRF1-208ENST00000472045 NUP85Q9BW27 656 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 ENTPD7Q9NQZ7 604 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 CDC23Q9UJX2 597 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 NR2E3Q9Y5X4 410 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 ZC3H4Q9UPT8 1303 aaKnown RBP13.06□□□□□ -0.32
IRF1-208ENST00000472045 MIF4GDA9UHW6 222 aaKnown RBP13.06□□□□□ -0.32
IRF1-208ENST00000472045 TAF6P49848 677 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 MAP7Q14244 749 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 ARHGAP15Q53QZ3 475 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 CALR3Q96L12 384 aaKnown RBP13.06□□□□□ -0.32
IRF1-208ENST00000472045 KLC2Q9H0B6 622 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 IL25Q9H293 177 aa13.06□□□□□ -0.32
IRF1-208ENST00000472045 DHX35Q9H5Z1 703 aaKnown RBP13.06□□□□□ -0.32
IRF1-208ENST00000472045 KLK14Q9P0G3 267 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms