RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 KCNV2Q8TDN2 545 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MAD2L2Q9UI95 211 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PPIEQ9UNP9 301 aaKnown RBP14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 FOSL2P15408 326 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SLC44A4Q53GD3 710 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TMEM179Q6ZVK1 233 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 COG1Q8WTW3 980 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 FRMD6Q96NE9 622 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DEPDC7Q96QD5 511 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GCOM2Q9BZD3 368 aaPredicted RBP14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ADNPQ9H2P0 1102 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SLC9A2Q9UBY0 812 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CAPN1P07384 714 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SDE2Q6IQ49 451 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MTBPQ96DY7 904 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ECE2O60344 883 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CYP2D6P10635 497 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RARBP10826 455 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GUCY2CP25092 1073 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KRT31Q15323 416 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 LMBRD2Q68DH5 695 aaPredicted RBP13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NUP85Q9BW27 656 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RNF146Q9NTX7 359 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 STAP1Q9ULZ2 295 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KPNA7A9QM74 516 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 USP17L10C9JJH3 530 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ZNF157P51786 506 aaPredicted RBP13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 EIF2B5Q13144 721 aaKnown RBP13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SEPT2Q15019 361 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RNASE11Q8TAA1 199 aaKnown RBP13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 USP33Q8TEY7 942 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MASTLQ96GX5 879 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 FOPNLQ96NB1 174 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SUPT3HO75486 399 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NR1D1P20393 614 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SLC44A5Q8NCS7 719 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DTNAQ9Y4J8 743 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SLC39A14Q15043 492 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ALS2CLQ60I27 953 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TRIM48Q8IWZ4 208 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 C10orf53Q8N6V4 93 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PABPC5Q96DU9 382 aaKnown RBP13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NEK2P51955 445 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CCDC142Q17RM4 750 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PADI6Q6TGC4 694 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GJB4Q9NTQ9 266 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MRFAP1Q9Y605 127 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MYO1GB0I1T2 1018 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NMT2O60551 498 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CYP21A2P08686 494 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 C6orf118Q5T5N4 469 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ARMC6Q6NXE6 501 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NLRP10Q86W26 655 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GPT2Q8TD30 523 aa13.99□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 POTEFA5A3E0 1075 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 POTEIP0CG38 1075 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SOAT1P35610 550 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 JAK3P52333 1124 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 POTEGQ6S5H5 508 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 POTEEQ6S8J3 1075 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SLC25A13Q9UJS0 675 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SYNCRIPO60506 623 aaKnown RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TYK2P29597 1187 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CDH6P55285 790 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TRIM71Q2Q1W2 868 aaKnown RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MGAT5BQ3V5L5 792 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SLFNL1Q499Z3 407 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ALFQ53S48 1182 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ITPRIPL1Q6GPH6 555 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ST13P4Q8IZP2 240 aaPredicted RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SIX5Q8N196 739 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MRPL4Q9BYD3 311 aaKnown RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 BRD8Q9H0E9 1235 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GTF2A1LQ9UNN4 478 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PKP3Q9Y446 797 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NDUFA10O95299 355 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 STAT3P40763 770 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 C11orf57Q6ZUT1 292 aaPredicted RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SYNE4Q8N205 404 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DIS3LQ8TF46 1054 aaKnown RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 POLR3FQ9H1D9 316 aaPredicted RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PARVBQ9HBI1 364 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DDX28Q9NUL7 540 aaKnown RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CAB39Q9Y376 341 aaPredicted RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CAPN15O75808 1086 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SESN2P58004 480 aaPredicted RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ARHGEF7Q14155 803 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 BEND6Q5SZJ8 279 aaPredicted RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PPP1R2P3Q6NXS1 205 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CYP26B1Q9NR63 512 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RBAKQ9NYW8 714 aaPredicted RBP13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 STMN3Q9NZ72 180 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KRT38O76015 456 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MAP3K10Q02779 954 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DEUP1Q05D60 604 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CBFBQ13951 182 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 E2F4Q16254 413 aa13.98□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CEP78Q5JTW2 689 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms