RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 CTDP1Q9Y5B0 961 aaPredicted RBP6.96□□□□□ -1.3
SPEN-204ENST00000471538 PCDHA10Q9Y5I2 948 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 SNCAIPQ9Y6H5 919 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 EMSYQ7Z589 1322 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 ADGRA3Q8IWK6 1321 aa6.96□□□□□ -1.3
SPEN-204ENST00000471538 ANKRD63C9JTQ0 380 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 LRRN2O75325 713 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 USP2O75604 605 aaPredicted RBP6.95□□□□□ -1.3
SPEN-204ENST00000471538 ZMYND10O75800 440 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 KIF4AO95239 1232 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 ATG7O95352 703 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 H2AFZP0C0S5 128 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 TMEM253P0C7T8 217 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 KRT13P13646 458 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 PAFAH1B1P43034 410 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 NPTX2P47972 431 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 GALCP54803 685 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 PPATQ06203 517 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 TCEAL1Q15170 157 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 IFI16Q16666 785 aaKnown RBP6.95□□□□□ -1.3
SPEN-204ENST00000471538 MAP9Q49MG5 647 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 CFAP221Q4G0U5 840 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 GLE1Q53GS7 698 aaKnown RBP6.95□□□□□ -1.3
SPEN-204ENST00000471538 XKR9Q5GH70 373 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 FAM102BQ5T8I3 360 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 H2AFVQ71UI9 128 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 VPS36Q86VN1 386 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 ARHGEF19Q8IW93 802 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 CCDC60Q8IWA6 550 aaPredicted RBP6.95□□□□□ -1.3
SPEN-204ENST00000471538 RDH13Q8NBN7 331 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 U2AF1L4Q8WU68 220 aaKnown RBP6.95□□□□□ -1.3
SPEN-204ENST00000471538 KIFAP3Q92845 792 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 ATP6V0A1Q93050 837 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 LRCH3Q96II8 777 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 CDHR1Q96JP9 859 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 TMEM117Q9H0C3 514 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 C17orf75Q9HAS0 396 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 JPH1Q9HDC5 661 aaPredicted RBP6.95□□□□□ -1.3
SPEN-204ENST00000471538 GABBR1Q9UBS5 961 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 HPCAL4Q9UM19 191 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 PACSIN2Q9UNF0 486 aaPredicted RBP6.95□□□□□ -1.3
SPEN-204ENST00000471538 COQ4Q9Y3A0 265 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 CEP290O15078 2479 aa6.95□□□□□ -1.3
SPEN-204ENST00000471538 IGKV6D-21A0A0A0MT36 114 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 FOXN3O00409 490 aaPredicted RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 DPYSL4O14531 572 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 DKC1O60832 514 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPEN-204ENST00000471538 EIF3JO75822 258 aaKnown RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 DGAT1O75907 488 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 SYF2O95926 243 aaKnown RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 PSAPP07602 524 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 SUPT20HL2P0C7V6 817 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 ATP4AP20648 1035 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 EDNRBP24530 442 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 GCLMP48507 274 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 HADHBP55084 474 aaKnown RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 NAP1L1P55209 391 aaKnown RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 HUNKP57058 714 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 ACTR2P61160 394 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 SP2Q02086 613 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 NOGQ13253 232 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 DMP1Q13316 513 aaPredicted RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 RPS6KA1Q15418 735 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 SUPT20HL1Q3ZLR7 823 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 TJAP1Q5JTD0 557 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 CCDC181Q5TID7 509 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 LBX2Q6XYB7 198 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 OTUD6AQ7L8S5 288 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 TAS1R3Q7RTX0 852 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 NT5DC3Q86UY8 548 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 PALB2Q86YC2 1186 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 CBWD2Q8IUF1 395 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 GLYCTKQ8IVS8 523 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 SULF1Q8IWU6 871 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 GSPT2Q8IYD1 628 aaKnown RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 RASGEF1CQ8N431 466 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 USP38Q8NB14 1042 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 CHST13Q8NET6 341 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 DNERQ8NFT8 737 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 ACTRT1Q8TDG2 376 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 PARD3BQ8TEW8 1205 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 SCFD2Q8WU76 684 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 RFFLQ8WZ73 363 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 HES6Q96HZ4 224 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 PBKQ96KB5 322 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 CEP170P1Q96L14 293 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 MFSD14AQ96MC6 490 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 CEP89Q96ST8 783 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 AGPAT1Q99943 283 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 KIFC3Q9BVG8 833 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 SELENOOQ9BVL4 669 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 ZCCHC17Q9NP64 241 aaKnown RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 GDF3Q9NR23 364 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 RNF186Q9NXI6 227 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 HOXC10Q9NYD6 342 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 TAS2R14Q9NYV8 317 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 TMOD4Q9NZQ9 345 aa6.94□□□□□ -1.3
SPEN-204ENST00000471538 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.94□□□□□ -1.3
SPEN-204ENST00000471538 STIM2Q9P246 746 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms