RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 IPPQ9Y573 584 aa13.96□□□□□ -0.17
HIGD1A-205ENST00000470543 DOCK6Q96HP0 2047 aa13.96□□□□□ -0.17
HIGD1A-205ENST00000470543 COL4A3Q01955 1670 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 GPR179Q6PRD1 2367 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 ARID2Q68CP9 1835 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 FAM170BA6NMN3 283 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 NCAM2O15394 837 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 PRPF3O43395 683 aaKnown RBP13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 PSMD10O75832 226 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 C1RP00736 705 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 HMGB1P09429 215 aaKnown RBP13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 NLRP5P59047 1200 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 EXOSC10Q01780 885 aaKnown RBP13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 PPM1LQ5SGD2 360 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 ZBTB41Q5SVQ8 909 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 UBXN11Q5T124 520 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 ANO5Q75V66 913 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 RNF168Q8IYW5 571 aaPredicted RBP13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 RNF149Q8NC42 400 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 TBCKQ8TEA7 893 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 TCP11Q8WWU5 503 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 PRPF31Q8WWY3 499 aaKnown RBP13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 TMEM143Q96AN5 459 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 CHAMP1Q96JM3 812 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 SLC26A6Q9BXS9 759 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 LTB4R2Q9NPC1 389 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 VPS54Q9P1Q0 977 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 FNIP2Q9P278 1114 aa13.95□□□□□ -0.18
HIGD1A-205ENST00000470543 DCDC2BA2VCK2 349 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 F8W810 466 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 XYLBO75191 536 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 TDP2O95551 362 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 RFC5P40937 340 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 NPEPPSP55786 919 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 DSC1Q08554 894 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 LAMTOR4Q0VGL1 99 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 Q4G0T1 1027 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 SLC44A4Q53GD3 710 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 TPRG1Q6ZUI0 275 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 SMG8Q8ND04 991 aaKnown RBP13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 CCDC51Q96ER9 411 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 ZFP42Q96MM3 310 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 KXD1Q9BQD3 176 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 RPP25Q9BUL9 199 aaKnown RBP13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 EIF2AQ9BY44 585 aaKnown RBP13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 OSBPL6Q9BZF3 934 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 EPC1Q9H2F5 836 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 MINDY3Q9H8M7 445 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 ADAM28Q9UKQ2 775 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 HES2Q9Y543 173 aa13.94□□□□□ -0.18
HIGD1A-205ENST00000470543 SF3B1O75533 1304 aaKnown RBP eCLIP13.93□□□□□ -0.187e-7■■■■■ 29.5
HIGD1A-205ENST00000470543 INO80B-WBP1J3KQ70 363 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 CCL16O15467 120 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 TADA2AO75478 443 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 STBD1O95210 358 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 HNRNPA1P09651 372 aaKnown RBP eCLIP13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 KCNA4P22459 653 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 AXLP30530 894 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 HOXA11P31270 313 aaPredicted RBP13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 QARSP47897 775 aaKnown RBP13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 NTHL1P78549 312 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 EMC2Q15006 297 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 ADCK5Q3MIX3 580 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 PRSS55Q6UWB4 352 aaPredicted RBP13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 RSPO2Q6UXX9 243 aaPredicted RBP13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 FGF13Q92913 245 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 BRF1Q92994 677 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 CPB2Q96IY4 423 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 GPR62Q9BZJ7 368 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 CHST7Q9NS84 486 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 FBXW11Q9UKB1 542 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 MRPS17Q9Y2R5 130 aaKnown RBP13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 MTF2Q9Y483 593 aaPredicted RBP13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 PPME1Q9Y570 386 aa13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 KMT2BQ9UMN6 2715 aaPredicted RBP13.93□□□□□ -0.18
HIGD1A-205ENST00000470543 TBC1D4O60343 1298 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 TSPAN1O60635 241 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 PAPLNO95428 1278 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 C8AP07357 584 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 CD72P21854 359 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 GRIK3Q13003 919 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 TFDP1Q14186 410 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 PPP2R5DQ14738 602 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 PCBP1Q15365 356 aaKnown RBP eCLIP13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 PSMD5Q16401 504 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 TSSK4Q6SA08 328 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 Q6ZUG5 572 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 CEP57Q86XR8 500 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 GPR65Q8IYL9 337 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 ZBTB44Q8NCP5 570 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 HASPINQ8TF76 798 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 CCDC43Q96MW1 224 aaKnown RBP13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 MTRQ99707 1265 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 DDX23Q9BUQ8 820 aaKnown RBP13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 RNF26Q9BY78 433 aaPredicted RBP13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 CSRNP2Q9H175 543 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 NXF3Q9H4D5 531 aaKnown RBP13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 PARP2Q9UGN5 583 aa13.92□□□□□ -0.18
HIGD1A-205ENST00000470543 DDX25Q9UHL0 483 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms