RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 DOCK5Q9H7D0 1870 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 RBBP6Q7Z6E9 1792 aaKnown RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 GOLGA6CA6NDK9 693 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 SMIM23A6NLE4 172 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 CSDE1O75534 798 aaKnown RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 PPP1R37O75864 691 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 GOLGA6DP0CG33 693 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 CCND2P30279 289 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 FLT3P36888 993 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 WNT7BP56706 349 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 ACTR2P61160 394 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 ERVK-9P63128 1117 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 CETN1Q12798 172 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 FOXD4Q12950 439 aaPredicted RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 AENQ8WTP8 325 aaKnown RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 OTUD5Q96G74 571 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 KREMEN1Q96MU8 473 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 AGPAT1Q99943 283 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 FAM118BQ9BPY3 351 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 TRIM7Q9C029 511 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 JPH1Q9HDC5 661 aaPredicted RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 GOLGA6AQ9NYA3 693 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 BZW2Q9Y6E2 419 aaKnown RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 PFASO15067 1338 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 ZEB2O60315 1214 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 HPDP32754 393 aaPredicted RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 CDR1P51861 262 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 DRP2Q13474 957 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 TMEM63BQ5T3F8 832 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 INTS8Q75QN2 995 aaKnown RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 ZBTB33Q86T24 672 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 NOP9Q86U38 636 aaKnown RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 LRRC57Q8N9N7 239 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 TMEM161BQ8NDZ6 487 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 NSUN6Q8TEA1 469 aaKnown RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 ZIM3Q96PE6 472 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 TCHPQ9BT92 498 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 POLR3FQ9H1D9 316 aaPredicted RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 NEUROG2Q9H2A3 272 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 TMEM206Q9H813 350 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 AMFRQ9UKV5 643 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 PTPN22Q9Y2R2 807 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 RPTORQ8N122 1335 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 POLR2AP24928 1970 aaKnown RBP10.15□□□□□ -0.78
TOP3A-203ENST00000469739 TARSL2A2RTX5 802 aaKnown RBP10.15□□□□□ -0.78
TOP3A-203ENST00000469739 GJB1P08034 283 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 BCRP11274 1271 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 POLGP54098 1239 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-203ENST00000469739 ZNF394Q53GI3 561 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 FAM182AQ5T1J6 154 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 FBXW10Q5XX13 1052 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 DCAF15Q66K64 600 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 SLC39A4Q6P5W5 647 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 IFT20Q8IY31 132 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 LMO3Q8TAP4 145 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 AFAP1L1Q8TED9 768 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 ALG3Q92685 438 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 CLMNQ96JQ2 1002 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 CYP39A1Q9NYL5 469 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 GJB6O95452 261 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 MCM3P25205 808 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 PRKCIP41743 596 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 SSR1P43307 286 aaKnown RBP10.15□□□□□ -0.78
TOP3A-203ENST00000469739 ZNF280AP59817 542 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-203ENST00000469739 TGFB2P61812 414 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 FOXR2Q6PJQ5 311 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 NT5DC3Q86UY8 548 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 ELP3Q9H9T3 547 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 ERVK-5Q9HDB9 667 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 SLC9A2Q9UBY0 812 aa10.15□□□□□ -0.78
TOP3A-203ENST00000469739 TTLL13PA6NNM8 815 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 PGRMC1O00264 195 aaKnown RBP10.14□□□□□ -0.79
TOP3A-203ENST00000469739 SRGAP2CP0DJJ0 459 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 PRLRP16471 622 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 KCNJ1P48048 391 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 TUBB4BP68371 445 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 KRT76Q01546 638 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 CFAP58Q5T655 872 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 KCNV1Q6PIU1 500 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 SV2AQ7L0J3 742 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 UBLCP1Q8WVY7 318 aaPredicted RBP10.14□□□□□ -0.79
TOP3A-203ENST00000469739 CPA5Q8WXQ8 436 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 CCDC97Q96F63 343 aaPredicted RBP10.14□□□□□ -0.79
TOP3A-203ENST00000469739 TARS2Q9BW92 718 aaKnown RBP10.14□□□□□ -0.79
TOP3A-203ENST00000469739 TEX13BQ9BXU2 312 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 XPNPEP1Q9NQW7 623 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 ALG6Q9Y672 507 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 ZC3H4Q9UPT8 1303 aaKnown RBP10.14□□□□□ -0.79
TOP3A-203ENST00000469739 TCRBV7S2A1N4TA0A589 114 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 SPDYE16A6NNV3 312 aaPredicted RBP10.14□□□□□ -0.79
TOP3A-203ENST00000469739 PLA2G6O60733 806 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 HSF2BPO75031 334 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 KCNA2P16389 499 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 LMNB1P20700 586 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 DSG3P32926 999 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 LIG4P49917 911 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 TNNC1P63316 161 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 DCAF12L1Q5VU92 463 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 C4orf19Q8IY42 314 aa10.14□□□□□ -0.79
TOP3A-203ENST00000469739 LRRC71Q8N4P6 559 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms