RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 FBXO18Q8NFZ0 1043 aa5.31□□□□□ -1.56
VPS8-220ENST00000469713 OR7D4Q8NG98 312 aa5.31□□□□□ -1.56
VPS8-220ENST00000469713 UHRF1Q96T88 793 aaPredicted RBP5.31□□□□□ -1.56
VPS8-220ENST00000469713 GPHA2Q96T91 129 aa5.31□□□□□ -1.56
VPS8-220ENST00000469713 PDCD2LQ9BRP1 358 aa5.31□□□□□ -1.56
VPS8-220ENST00000469713 BCO1Q9HAY6 547 aa5.31□□□□□ -1.56
VPS8-220ENST00000469713 JADE2Q9NQC1 790 aa5.31□□□□□ -1.56
VPS8-220ENST00000469713 PRDM11Q9NQV5 511 aa5.31□□□□□ -1.56
VPS8-220ENST00000469713 NCDNQ9UBB6 729 aa5.31□□□□□ -1.56
VPS8-220ENST00000469713 PCDHB1Q9Y5F3 818 aa5.31□□□□□ -1.56
VPS8-220ENST00000469713 CFAP20Q9Y6A4 193 aaKnown RBP5.31□□□□□ -1.56
VPS8-220ENST00000469713 ALDH2P05091 517 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 GYPEP15421 78 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 TARDBPQ13148 414 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS8-220ENST00000469713 GAGE13Q4V321 117 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 GJC2Q5T442 439 aaPredicted RBP5.3□□□□□ -1.56
VPS8-220ENST00000469713 DENND1CQ8IV53 801 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 SP8Q8IXZ3 490 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 CCDC146Q8IYE0 955 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 TRMT2AQ8IZ69 625 aaKnown RBP5.3□□□□□ -1.56
VPS8-220ENST00000469713 ZGPATQ8N5A5 531 aaKnown RBP5.3□□□□□ -1.56
VPS8-220ENST00000469713 CAMKK1Q8N5S9 505 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 CCHCR1Q8TD31 782 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 NSUN6Q8TEA1 469 aaKnown RBP5.3□□□□□ -1.56
VPS8-220ENST00000469713 RABGGTAQ92696 567 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 C1GALT1C1Q96EU7 318 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 MANSC1Q9H8J5 431 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 C1orf112Q9NSG2 853 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 TDP1Q9NUW8 608 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 USP40Q9NVE5 1235 aa5.3□□□□□ -1.56
VPS8-220ENST00000469713 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.3□□□□□ -1.56
VPS8-220ENST00000469713 PUF60Q9UHX1 559 aaKnown RBP5.3□□□□□ -1.56
VPS8-220ENST00000469713 FRMPD2Q68DX3 1309 aaPredicted RBP5.29□□□□□ -1.56
VPS8-220ENST00000469713 LRRC14BA6NHZ5 514 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 DBX1A6NMT0 343 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 A6NNZ2 444 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 WNT10BO00744 389 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 SLC26A4O43511 780 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 CAND2O75155 1236 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 AMY1AP04745 511 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 SYN1P17600 705 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 CRHR1P34998 444 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 RAC3P60763 192 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 CDC42EP1Q00587 391 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 RIN1Q13671 783 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 GALEQ14376 348 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 PRAMEF14Q5SWL7 426 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 PPP4R3AQ6IN85 833 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 OVCH2Q7RTZ1 564 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 ADGRE4PQ86SQ3 457 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 DRC7Q8IY82 874 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 CMTM4Q8IZR5 234 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 LGI4Q8N135 537 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 FEZF2Q8TBJ5 459 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 MDM1Q8TC05 714 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 RGMAQ96B86 450 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 NEIL1Q96FI4 390 aaPredicted RBP5.29□□□□□ -1.56
VPS8-220ENST00000469713 TMX3Q96JJ7 454 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 CLPTM1LQ96KA5 538 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 FAM193BQ96PV7 902 aaPredicted RBP5.29□□□□□ -1.56
VPS8-220ENST00000469713 DPYSL5Q9BPU6 564 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 SENP6Q9GZR1 1112 aaPredicted RBP5.29□□□□□ -1.56
VPS8-220ENST00000469713 C12orf65Q9H3J6 166 aaKnown RBP5.29□□□□□ -1.56
VPS8-220ENST00000469713 AGO3Q9H9G7 860 aaKnown RBP5.29□□□□□ -1.56
VPS8-220ENST00000469713 IL23AQ9NPF7 189 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 LANCL2Q9NS86 450 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 DUSP10Q9Y6W6 482 aa5.29□□□□□ -1.56
VPS8-220ENST00000469713 CCDC194A0A1B0GVG4 234 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 H3BML4 177 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 NRP1O14786 923 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 SGTAO43765 313 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 UBXN7O94888 489 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 GASTP01350 101 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 FTLP02792 175 aaPredicted RBP5.28□□□□□ -1.56
VPS8-220ENST00000469713 FPR1P21462 350 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 PTPN7P35236 360 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 MAP2K6P52564 334 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 ARHGEF18Q6ZSZ5 1173 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 PLEKHH3Q7Z736 793 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 TTC7BQ86TV6 843 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 RSPH3Q86UC2 560 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 SHCBP1Q8NEM2 672 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 OR5M3Q8NGP4 307 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 ZSCAN18Q8TBC5 510 aaPredicted RBP5.28□□□□□ -1.56
VPS8-220ENST00000469713 STON2Q8WXE9 905 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 LRRC37BQ96QE4 947 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 DMRTA2Q96SC8 542 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 CDC5LQ99459 802 aaKnown RBP5.28□□□□□ -1.56
VPS8-220ENST00000469713 CGRRF1Q99675 332 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 PTPN18Q99952 460 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 ENKD1Q9H0I2 346 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 SLC52A1Q9NWF4 448 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 AJAP1Q9UKB5 411 aaPredicted RBP5.28□□□□□ -1.56
VPS8-220ENST00000469713 OAZ3Q9UMX2 235 aa5.28□□□□□ -1.56
VPS8-220ENST00000469713 MYBBP1AQ9BQG0 1328 aaKnown RBP5.27□□□□□ -1.57
VPS8-220ENST00000469713 UBE2QL1A1L167 161 aa5.27□□□□□ -1.57
VPS8-220ENST00000469713 B3GALT2O43825 422 aa5.27□□□□□ -1.57
VPS8-220ENST00000469713 GPR32O75388 356 aa5.27□□□□□ -1.57
VPS8-220ENST00000469713 TUSC2O75896 110 aa5.27□□□□□ -1.57
VPS8-220ENST00000469713 SASH1O94885 1247 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms