RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 EDEM3Q9BZQ6 932 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 FTOQ9C0B1 505 aaKnown RBP eCLIP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 MUC3BQ9H195 1237 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 EHD4Q9H223 541 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 CARD9Q9H257 536 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 PANK4Q9NVE7 773 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 PTTG2Q9NZH5 202 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 SUCLA2Q9P2R7 463 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 SAP30BPQ9UHR5 308 aaKnown RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 KCNH3Q9ULD8 1083 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 CAPN11Q9UMQ6 739 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 SPG7Q9UQ90 795 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ARL2BPQ9Y2Y0 163 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 L3MBTL1Q9Y468 752 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 USP15Q9Y4E8 981 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-207ENST00000468925 TTLL3Q9Y4R7 772 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 PCDHA5Q9Y5H7 936 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 USH1CQ9Y6N9 552 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 CARMIL3Q8ND23 1372 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ADAMTSL3P82987 1691 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 ATP8B3O60423 1300 aa5.23□□□□□ -1.57
SF3B1-207ENST00000468925 MED1Q15648 1581 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 A0A1W2PP64 1363 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ARHGAP10A1A4S6 786 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 HMX2A2RU54 273 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 IQCA1LA6NCM1 817 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 TMEM247A6NEH6 219 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 TRAFD1O14545 582 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 NDC80O14777 642 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 NVLO15381 856 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 CYP27B1O15528 508 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 CTNND1O60716 968 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 TPPPO94811 219 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 AGTP01019 485 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 KRT14P02533 472 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ASLP04424 464 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 GYPCP04921 128 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ATP1A1P05023 1023 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 HNRNPCP07910 306 aaKnown RBP eCLIP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 HOXB7P09629 217 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 PABPC4LP0CB38 370 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 PTPRAP18433 802 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 CES1P23141 567 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 STIP1P31948 543 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 CTNNA1P35221 906 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 MLH1P40692 756 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 IARSP41252 1262 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 MAPK8P45983 427 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 DNM2P50570 870 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 CCT8P50990 548 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ALDH5A1P51649 535 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 USP11P51784 963 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 SEC24CP53992 1094 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 IRX4P78413 519 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 AMPD3Q01432 767 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 CEBPZQ03701 1054 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ADCY1Q08828 1119 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 TRIM29Q14134 588 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 CNGA3Q16281 694 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ZNF394Q53GI3 561 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 TTC39AQ5SRH9 613 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 FKBP15Q5T1M5 1219 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 WDR78Q5VTH9 848 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 HGSNATQ68CP4 663 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 HAUS3Q68CZ6 603 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 RNF43Q68DV7 783 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 GRAMD4Q6IC98 578 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 PI16Q6UXB8 463 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 COL23A1Q86Y22 540 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ARMC10Q8N2F6 343 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 SCAIQ8N9R8 606 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 DQX1Q8TE96 717 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 USP33Q8TEY7 942 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 DIS3LQ8TF46 1054 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 FAM136AQ96C01 138 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 TLCD1Q96CP7 247 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 VPS50Q96JG6 964 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 CLMNQ96JQ2 1002 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ZNF317Q96PQ6 595 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 RPS6KC1Q96S38 1066 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 SH3GL1Q99961 368 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 UBAC1Q9BSL1 405 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 LRRC1Q9BTT6 524 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 DSCC1Q9BVC3 393 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 GGNBP2Q9H3C7 697 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ECT2Q9H8V3 914 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 SRA1Q9HD15 236 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 DDX43Q9NXZ2 648 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ADAM22Q9P0K1 906 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 DLGAP2Q9P1A6 1054 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 KLHL14Q9P2G3 628 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 ZNF212Q9UDV6 495 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 HERC5Q9UII4 1024 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 CNOT7Q9UIV1 285 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 RWDD2AQ9UIY3 292 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 MAN1B1Q9UKM7 699 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 SATB2Q9UPW6 733 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 PLAAQ9Y263 795 aa5.22□□□□□ -1.57
SF3B1-207ENST00000468925 R3HDM2Q9Y2K5 976 aaKnown RBP5.22□□□□□ -1.57
SF3B1-207ENST00000468925 PRKAB1Q9Y478 270 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms