RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 EDN1P05305 212 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 MCF2P10911 925 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 KRT17Q04695 432 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 EEF1DP3Q658K8 133 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 CNNM4Q6P4Q7 775 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 CCDC65Q8IXS2 484 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 THNSL1Q8IYQ7 743 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 CEP57L1Q8IYX8 460 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 HVCN1Q96D96 273 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 FAM193BQ96PV7 902 aaPredicted RBP16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 TCHPQ9BT92 498 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 TARS2Q9BW92 718 aaKnown RBP16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 APOL6Q9BWW8 343 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 PTPRHQ9HD43 1115 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 SPG21Q9NZD8 308 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 PARP2Q9UGN5 583 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 PUF60Q9UHX1 559 aaKnown RBP16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 TBX20Q9UMR3 447 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 LZTS1Q9Y250 596 aa16.23■□□□□ 0.19
TMEM39A-205ENST00000468676 A0A1W2PQ27 194 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 A0A1W2PQ64 194 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 A0A1W2PQD8 194 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 FGF18O76093 207 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 ITGB1P05556 798 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 IDEP14735 1019 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 PROZP22891 400 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 BCAR1P56945 870 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 GTF2BQ00403 316 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 PLCB3Q01970 1234 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 ALCAMQ13740 583 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 ZNF568Q3ZCX4 644 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 TIGD5Q53EQ6 642 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 MPZL3Q6UWV2 235 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 SPPL3Q8TCT6 385 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 GAD1Q99259 594 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 TMEM175Q9BSA9 504 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 OLFML3Q9NRN5 406 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 PANK4Q9NVE7 773 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 STK39Q9UEW8 545 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 USP20Q9Y2K6 914 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 MYO7AQ13402 2215 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 PRUNE2Q8WUY3 3088 aa16.22■□□□□ 0.19
TMEM39A-205ENST00000468676 FRMD3A2A2Y4 597 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 GRM6O15303 877 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 ZC3H11AO75152 810 aaKnown RBP eCLIP16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 NR1I2O75469 434 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 PIGRP01833 764 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 ALDH2P05091 517 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 SLFN14P0C7P3 912 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 AKAP5P24588 427 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 MLH1P40692 756 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 GRM5P41594 1212 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 KYAT1Q16773 422 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 HERC4Q5GLZ8 1057 aaPredicted RBP16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 PDE12Q6L8Q7 609 aaKnown RBP16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 ZNF720Q7Z2F6 126 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 SFR1Q86XK3 245 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 BICD1Q96G01 975 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 CHAMP1Q96JM3 812 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 RPS6KC1Q96S38 1066 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 FIZ1Q96SL8 496 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 C7orf25Q9BPX7 421 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 CCDC94Q9BW85 323 aaPredicted RBP16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 TRIM9Q9C026 710 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 CDT1Q9H211 546 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 NRDE2Q9H7Z3 1164 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 MRPL44Q9H9J2 332 aaKnown RBP16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 ALG13Q9NP73 1137 aaKnown RBP16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 SNTG2Q9NY99 539 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 HCSTQ9UBK5 93 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 PCDHB13Q9Y5F0 798 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 EYSQ5T1H1 3165 aa16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 TDRD15B5MCY1 1934 aaKnown RBP16.21■□□□□ 0.19
TMEM39A-205ENST00000468676 FAM237AA0A1B0GTK4 181 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 HNRNPDLO14979 420 aaKnown RBP16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 CLDN3O15551 220 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 RECQL4O94761 1208 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 POMCP01189 267 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 GALTP07902 379 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 PFKFB1P16118 471 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 NMT1P30419 496 aaKnown RBP16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 LIG4P49917 911 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 YARSP54577 528 aaKnown RBP16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 MCL1Q07820 350 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 GRIK3Q13003 919 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 NOLC1Q14978 699 aaKnown RBP eCLIP16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 STXBP4Q6ZWJ1 553 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 MAP4K3Q8IVH8 894 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 SLC39A11Q8N1S5 342 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 MICALL1Q8N3F8 863 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 POF1BQ8WVV4 589 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 MRPS27Q92552 414 aaKnown RBP16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 PPP2R3CQ969Q6 453 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 TMEM169Q96HH4 297 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 ZFP42Q96MM3 310 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 GBP3Q9H0R5 595 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 TOPORSQ9NS56 1045 aaPredicted RBP16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 HPSEQ9Y251 543 aa16.2■□□□□ 0.18
TMEM39A-205ENST00000468676 A0A1B0GVL5 298 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms