RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 FDPSP14324 419 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 ENDOUP21128 410 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 FUT4P22083 530 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 BMP8BP34820 402 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 USP14P54578 494 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 HMGCS2P54868 508 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 HMGN5P82970 282 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 ZP2Q05996 745 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 EGR3Q06889 387 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 ZNF543Q08ER8 600 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 GRB10Q13322 594 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 TRIM29Q14134 588 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 PPP2R5BQ15173 497 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 NTRK3Q16288 839 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 CST9Q5W186 159 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 CWF19L1Q69YN2 538 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 CCDC174Q6PII3 467 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 POMZP3Q6PJE2 187 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 CRTC3Q6UUV7 619 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 TMTC3Q6ZXV5 915 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 DPH6Q7L8W6 267 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 ARHGEF39Q8N4T4 335 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 BVESQ8NE79 360 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 SMARCC2Q8TAQ2 1214 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 DCAF4Q8WV16 495 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 OPTNQ96CV9 577 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 C8orf76Q96K31 380 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 AIFM3Q96NN9 605 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 DEPDC7Q96QD5 511 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 PIGSQ96S52 555 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 LZTS2Q9BRK4 669 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 LLPHQ9BRT6 129 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 ALG1Q9BT22 464 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 SH2D4AQ9H788 454 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 VCPKMTQ9H867 229 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 CARS2Q9HA77 564 aaKnown RBP4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 GJB4Q9NTQ9 266 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 SNTG2Q9NY99 539 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 TMOD4Q9NZQ9 345 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 CHMP5Q9NZZ3 219 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 TCFL5Q9UL49 500 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 KCNJ14Q9UNX9 436 aa4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 CTDP1Q9Y5B0 961 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-204ENST00000468545 SIPA1L1O43166 1804 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 PLIN4Q96Q06 1357 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 SSC5DA1L4H1 1573 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 CCDC85CA6NKD9 419 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 C19orf81C9J6K1 198 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 CYTH3O43739 400 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 STX6O43752 255 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 FLOT1O75955 427 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 ZNF205O95201 554 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 DEXIO95424 95 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 SYPP08247 313 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 IFNAR1P17181 557 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 TAL1P17542 331 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 SYT1P21579 422 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 NOVP48745 357 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 BACE1P56817 501 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 HUNKP57058 714 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 NLRP5P59047 1200 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 NUCB2P80303 420 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 TEKQ02763 1124 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 PPATQ06203 517 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 PKP1Q13835 747 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 PPP2R5DQ14738 602 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 PLCL1Q15111 1095 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 CCDC144BQ3MJ40 725 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 SV2CQ496J9 727 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 ASPRV1Q53RT3 343 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 GPATCH4Q5T3I0 446 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 SYDE2Q5VT97 1194 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 SLC23A3Q6PIS1 610 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 HEATR3Q7Z4Q2 680 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 FERMT3Q86UX7 667 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 ERO1BQ86YB8 467 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 TP53INP2Q8IXH6 220 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 ADGRF4Q8IZF3 695 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 CPXCR1Q8N123 301 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 SMC1BQ8NDV3 1235 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 GMCL1P1Q8NEA9 526 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 CHURC1Q8WUH1 139 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 WASF1Q92558 559 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 PPP1R14AQ96A00 147 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 COA7Q96BR5 231 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 RRP36Q96EU6 259 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 SRPK1Q96SB4 655 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 MAP3K14Q99558 947 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 FOXP3Q9BZS1 431 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 RPAP3Q9H6T3 665 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 ZSWIM4Q9H7M6 989 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 JMJD4Q9H9V9 463 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 FBXO28Q9NVF7 368 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 VPS54Q9P1Q0 977 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 SEC63Q9UGP8 760 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 ABT1Q9ULW3 272 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 AKT3Q9Y243 479 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 EMC9Q9Y3B6 208 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 KIF3AQ9Y496 699 aa4.67□□□□□ -1.66
TMEM39A-204ENST00000468545 AFG3L2Q9Y4W6 797 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms