RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 RSAD1Q9HA92 442 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 PANK4Q9NVE7 773 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 HNRNPDLO14979 420 aaKnown RBP12.12□□□□□ -0.47
MSH5-212ENST00000467319 KLRC4O43908 158 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 FAM189A1O60320 539 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 B4GALT3O60512 393 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 LPXNO60711 386 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 OFD1O75665 1012 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 MCF2P10911 925 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 IDEP14735 1019 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 AFF1P51825 1210 aaKnown RBP12.12□□□□□ -0.47
MSH5-212ENST00000467319 MCL1Q07820 350 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 NOLC1Q14978 699 aaKnown RBP eCLIP12.12□□□□□ -0.47
MSH5-212ENST00000467319 EPC2Q52LR7 807 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 ZC2HC1CQ53FD0 456 aaPredicted RBP12.12□□□□□ -0.47
MSH5-212ENST00000467319 NOMO2Q5JPE7 1267 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 EPM2AIP1Q7L775 607 aaPredicted RBP12.12□□□□□ -0.47
MSH5-212ENST00000467319 HACE1Q8IYU2 909 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 ABI1Q8IZP0 508 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 GLIS3Q8NEA6 775 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 GSTCDQ8NEC7 633 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 FAM161BQ96MY7 647 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 ADPGKQ9BRR6 497 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 TRIM6Q9C030 488 aaPredicted RBP12.12□□□□□ -0.47
MSH5-212ENST00000467319 HAPLN2Q9GZV7 340 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 BLZF1Q9H2G9 400 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 MRPL44Q9H9J2 332 aaKnown RBP12.12□□□□□ -0.47
MSH5-212ENST00000467319 UBN1Q9NPG3 1134 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 TBC1D13Q9NVG8 400 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 GIT1Q9Y2X7 761 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 RWDD3Q9Y3V2 267 aa12.12□□□□□ -0.47
MSH5-212ENST00000467319 PVALEFA0A1B0GWK0 134 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 ARL5CA6NH57 179 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 MEFVO15553 781 aaPredicted RBP12.11□□□□□ -0.47
MSH5-212ENST00000467319 GTPBP6O43824 516 aaPredicted RBP12.11□□□□□ -0.47
MSH5-212ENST00000467319 GADD45BO75293 160 aaPredicted RBP12.11□□□□□ -0.47
MSH5-212ENST00000467319 RECQL4O94761 1208 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 ZNF202O95125 648 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 MYBP10242 640 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 ITGA4P13612 1032 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 CTNNB1P35222 781 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 BMPR1AP36894 532 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 MLH1P40692 756 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 GRM5P41594 1212 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 AFMP43652 599 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 KCNA1Q09470 495 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 DPYDQ12882 1025 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 ADGRE1Q14246 886 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 HERC4Q5GLZ8 1057 aaPredicted RBP12.11□□□□□ -0.47
MSH5-212ENST00000467319 FAM26FQ5R3K3 315 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 L1TD1Q5T7N2 865 aaKnown RBP12.11□□□□□ -0.47
MSH5-212ENST00000467319 APBB1IPQ7Z5R6 666 aaPredicted RBP12.11□□□□□ -0.47
MSH5-212ENST00000467319 TMEM192Q8IY95 271 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 CEP120Q8N960 986 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 GDPD5Q8WTR4 605 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 ARNTL2Q8WYA1 636 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 HPS3Q969F9 1004 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 ZFP42Q96MM3 310 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 CDX2Q99626 313 aaPredicted RBP12.11□□□□□ -0.47
MSH5-212ENST00000467319 PLVAPQ9BX97 442 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 PRDM12Q9H4Q4 367 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 TYW1Q9NV66 732 aaKnown RBP12.11□□□□□ -0.47
MSH5-212ENST00000467319 TBC1D7Q9P0N9 293 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 ANKFY1Q9P2R3 1169 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 MTUS1Q9ULD2 1270 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 STYXL1Q9Y6J8 313 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 UBE4BO95155 1302 aa12.11□□□□□ -0.47
MSH5-212ENST00000467319 PDCD11Q14690 1871 aaKnown RBP12.1□□□□□ -0.47
MSH5-212ENST00000467319 PLXNA4Q9HCM2 1894 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 GOLGA6L4A6NEF3 574 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 TISP43B9A030 160 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 PTGESO14684 152 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 EIF3DO15371 548 aaKnown RBP eCLIP12.1□□□□□ -0.47
MSH5-212ENST00000467319 GCNT3O95395 438 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 LAG3P18627 525 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 AKAP5P24588 427 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 HOXD13P35453 343 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 LIG4P49917 911 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 DSC1Q08554 894 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 BMT2Q1RMZ1 405 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 TMEM132AQ24JP5 1023 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 COLGALT1Q8NBJ5 622 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 FBXO22Q8NEZ5 403 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 URGCPQ8TCY9 931 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 P2RX5Q93086 422 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 ZBTB45Q96K62 511 aaPredicted RBP12.1□□□□□ -0.47
MSH5-212ENST00000467319 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 GAD1Q99259 594 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 IKZF4Q9H2S9 585 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 CERS4Q9HA82 394 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 PLAGL2Q9UPG8 496 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 INPP5FQ9Y2H2 1132 aa12.1□□□□□ -0.47
MSH5-212ENST00000467319 PRUNE2Q8WUY3 3088 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 TDRD15B5MCY1 1934 aaKnown RBP12.09□□□□□ -0.47
MSH5-212ENST00000467319 A0A0B4J269 797 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 ANKRD63C9JTQ0 380 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 H3BNC9 293 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 CLDN3O15551 220 aa12.09□□□□□ -0.47
MSH5-212ENST00000467319 NR1I2O75469 434 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms