RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 SCN5AQ14524 2016 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 PWP2Q15269 919 aaKnown RBP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 SMAD2Q15796 467 aaKnown RBP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 ZC3H12AQ5D1E8 599 aaKnown RBP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 KRTAP5-3Q6L8H2 238 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 LLGL2Q6P1M3 1020 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 NFRKBQ6P4R8 1299 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 NOL8Q76FK4 1167 aaKnown RBP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 DPH6Q7L8W6 267 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 PDZD3Q86UT5 571 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 MIGA1Q8NAN2 632 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 CAGE1Q8TC20 777 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 AFAP1L1Q8TED9 768 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 NKD1Q969G9 470 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 SPATA32Q96LK8 384 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 FGD4Q96M96 766 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 RIOK1Q9BRS2 568 aaKnown RBP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 EMILIN2Q9BXX0 1053 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 API5Q9BZZ5 524 aaKnown RBP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 FOXQ1Q9C009 403 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 FTOQ9C0B1 505 aaKnown RBP eCLIP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 PIH1D3Q9NQM4 214 aaKnown RBP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 FBXO28Q9NVF7 368 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 MCM9Q9NXL9 1143 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 SYNPO2Q9UMS6 1093 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 SMG5Q9UPR3 1016 aaKnown RBP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 CACNA1HO95180 2353 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 COL4A6Q14031 1691 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 KMT2EQ8IZD2 1858 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 ABHD14A-ACY1A0A1B0GW23 586 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 FAM221AA4D161 298 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 LINC01553A4QN01 128 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 ZBED4O75132 1171 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 STK10O94804 968 aaKnown RBP6.45□□□□□ -1.38
PTCD3-207ENST00000467273 CT47B1P0C2W7 299 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-207ENST00000467273 MED14OSP0DP75 135 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 SOX9P48436 509 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 RBL2Q08999 1139 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 LRRC14Q15048 493 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 SEZ6Q53EL9 994 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 BRDTQ58F21 947 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-207ENST00000467273 TNNI3KQ59H18 835 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 CDKAL1Q5VV42 579 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 CNKSR3Q6P9H4 555 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 SLITRK4Q8IW52 837 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 AMOTL1Q8IY63 956 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 FAM133AQ8N9E0 248 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 GATAD2BQ8WXI9 593 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 GAL3ST3Q96A11 431 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 HSPA12BQ96MM6 686 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 MEIS3Q99687 375 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 LNPKQ9C0E8 428 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 SLC38A10Q9HBR0 1119 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 VTA1Q9NP79 307 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 ATP8A2Q9NTI2 1148 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 TRMT13Q9NUP7 481 aaKnown RBP6.45□□□□□ -1.38
PTCD3-207ENST00000467273 RIPK3Q9Y572 518 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 INSL6Q9Y581 213 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 CTDP1Q9Y5B0 961 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-207ENST00000467273 FPGT-TNNI3KV9GXZ4 949 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 SCN10AQ9Y5Y9 1956 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 TECTAO75443 2155 aa6.45□□□□□ -1.38
PTCD3-207ENST00000467273 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-207ENST00000467273 LCHNA4D1U4 455 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 TMEM221A6NGB7 291 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 M0R296 226 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 CXCL10P02778 98 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 SSBP05455 408 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTCD3-207ENST00000467273 CYP2C9P11712 490 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 EEF2P13639 858 aaKnown RBP6.44□□□□□ -1.38
PTCD3-207ENST00000467273 AKR1B1P15121 316 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 GLDCP23378 1020 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 PSMC6P62333 389 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 PURAQ00577 322 aaKnown RBP6.44□□□□□ -1.38
PTCD3-207ENST00000467273 TTF1Q15361 905 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-207ENST00000467273 TKFCQ3LXA3 575 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 DUSP28Q4G0W2 176 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 PPM1JQ5JR12 505 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 FAM83BQ5T0W9 1011 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 UBE3DQ7Z6J8 389 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 TEX2Q8IWB9 1127 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 RPAP2Q8IXW5 612 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-207ENST00000467273 ABHD4Q8TB40 342 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTCD3-207ENST00000467273 CCDC136Q96JN2 1154 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 CRBNQ96SW2 442 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 MTG1Q9BT17 334 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-207ENST00000467273 SMC4Q9NTJ3 1288 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 MUTYHQ9UIF7 546 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 MRVI1Q9Y6F6 885 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 WDR87Q6ZQQ6 2873 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 KMT2BQ9UMN6 2715 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-207ENST00000467273 RAD50Q92878 1312 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 VPS13AQ96RL7 3174 aa6.44□□□□□ -1.38
PTCD3-207ENST00000467273 ZNF292O60281 2723 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 GREB1LQ9C091 1923 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-207ENST00000467273 H3BNC9 293 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 H3BQ06 376 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-207ENST00000467273 H3BS24 57 aa6.43□□□□□ -1.38
PTCD3-207ENST00000467273 NKRFO15226 690 aaKnown RBP eCLIP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms