RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 GYPEP15421 78 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 HTR1BP28222 390 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 SREBF1P36956 1147 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 SLC6A9P48067 706 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 ADCY7P51828 1080 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 HK3P52790 923 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 GPSM2P81274 684 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 GALEQ14376 348 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 KCNA10Q16322 511 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 DARS2Q6PI48 645 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 PDZD4Q76G19 769 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 DAAM2Q86T65 1068 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 FAM124AQ86V42 546 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 PPP1R35Q8TAP8 253 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 RGMAQ96B86 450 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 TLR9Q9NR96 1032 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 TRPS1Q9UHF7 1281 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 SIK3Q9Y2K2 1263 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 RBM8AQ9Y5S9 174 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 MROH6A6NGR9 719 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 FTLP02792 175 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 MAP2K6P52564 334 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 LINC00310P59036 64 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 DUSP2Q05923 314 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 BRD3Q15059 726 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 NPNTQ6UXI9 565 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 RSPH3Q86UC2 560 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 ZNF761Q86XN6 746 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 PQLC1Q8N2U9 271 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 MSL3Q8N5Y2 521 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 POU5F2Q8N7G0 328 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 KLHDC4Q8TBB5 520 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 CASKIN2Q8WXE0 1202 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 KAT5Q92993 513 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 MBD6Q96DN6 1003 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 SLC39A13Q96H72 371 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 CLPTM1LQ96KA5 538 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 MRGPRX4Q96LA9 322 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 RPS6KC1Q96S38 1066 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 DMRTA2Q96SC8 542 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 LRFN3Q9BTN0 628 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 LANCL2Q9NS86 450 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 ING3Q9NXR8 418 aa5.52□□□□□ -1.53
CDC42BPA-211ENST00000466538 CAPN8A6NHC0 703 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 A6NNZ2 444 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 GOLIM4O00461 696 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 ARHGAP6O43182 974 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 TOX4O94842 621 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 FTH1P19P0C7X4 201 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 ZNF888P0CJ79 500 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 IL2RBP14784 551 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 RAP1GAPP47736 663 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 RRADP55042 308 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 BPIFB4P59827 614 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 ATP2C1P98194 919 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 HGFACQ04756 655 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 LLGL1Q15334 1064 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 KIAA0753Q2KHM9 967 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 ZNF568Q3ZCX4 644 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 CCDC157Q569K6 752 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 SYCP2LQ5T4T6 812 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 CCDC149Q6ZUS6 474 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 RALYLQ86SE5 291 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 CMTM4Q8IZR5 234 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 FAM156AQ8NDB6 213 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 RABGGTAQ92696 567 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 PMM1Q92871 262 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 UHRF1Q96T88 793 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 PSMD1Q99460 953 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 B3GNT5Q9BYG0 378 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 TMEM140Q9NV12 185 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 RNF114Q9Y508 228 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 COMMD10Q9Y6G5 202 aa5.51□□□□□ -1.53
CDC42BPA-211ENST00000466538 MYBBP1AQ9BQG0 1328 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 APAF1O14727 1248 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 TEX33O43247 280 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 ADCY6O43306 1168 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 PAX4O43316 350 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 ITGA10O75578 1167 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 GUCY1A2P33402 732 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 NKX6-1P78426 367 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 TARDBPQ13148 414 aaKnown RBP eCLIP5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 NOGQ13253 232 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 SEMA5AQ13591 1074 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 FGL2Q14314 439 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 VPS72Q15906 364 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 KHDC1Q4VXA5 237 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 RNF220Q5VTB9 566 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 TCERG1LQ5VWI1 586 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 KRT40Q6A162 431 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 MAEAQ7L5Y9 396 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 KBTBD2Q8IY47 623 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 LILRA3Q8N6C8 439 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 ANKRD53Q8N9V6 530 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 TP53I13Q8NBR0 393 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 CCHCR1Q8TD31 782 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 MTFMTQ96DP5 389 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 SAMD11Q96NU1 681 aa5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 SENP6Q9GZR1 1112 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-211ENST00000466538 KIAA1683Q9H0B3 1180 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms