RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 GTF3C6Q969F1 213 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 EMID1Q96A84 441 aaPredicted RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 NACC2Q96BF6 587 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 INPP4AQ96PE3 977 aaPredicted RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 C16orf70Q9BSU1 422 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 LMAN2LQ9H0V9 348 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 BCAS3Q9H6U6 928 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 PSTPIP2Q9H939 334 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 RC3H2Q9HBD1 1191 aaKnown RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 CD248Q9HCU0 757 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 RIC8AQ9NPQ8 531 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 CHMP5Q9NZZ3 219 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 SEL1LQ9UBV2 794 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 IP6K2Q9UHH9 426 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 FARP1Q9Y4F1 1045 aaPredicted RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 BAHCC1Q9P281 2608 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 KMT2BQ9UMN6 2715 aaPredicted RBP8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 DYTNA2CJ06 578 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 ADAMTS3O15072 1205 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 CTDNEP1O95476 244 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 RB1P06400 928 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 SMIM10L2AP0DMW4 78 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 SMIM10L2BP0DMW5 78 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 HOXD8P13378 290 aaPredicted RBP8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 ENPP1P22413 925 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 MAPK1P28482 360 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 CCND2P30279 289 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 GNALP38405 381 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 NRIP1P48552 1158 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 ADCY7P51828 1080 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 CDR1P51861 262 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 NSUN2Q08J23 767 aaKnown RBP eCLIP8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 STK3Q13188 491 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 BTG3Q14201 252 aaPredicted RBP8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 NOLC1Q14978 699 aaKnown RBP eCLIP8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 NPY5RQ15761 445 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 ME3Q16798 604 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 TTC31Q49AM3 519 aaPredicted RBP8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 AGAP9Q5VTM2 703 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 PCNX4Q63HM2 1172 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 VSIG10LQ86VR7 867 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 SMARCC2Q8TAQ2 1214 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 USP33Q8TEY7 942 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 CLP1Q92989 425 aaKnown RBP8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 CUL5Q93034 780 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 RNF34Q969K3 372 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 SPATA33Q96N06 139 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 AIFM3Q96NN9 605 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 IER2Q9BTL4 223 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 SLC26A6Q9BXS9 759 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 ZMYND12Q9H0C1 365 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 RNPEPQ9H4A4 650 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 XPO7Q9UIA9 1087 aaKnown RBP8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 NOVA2Q9UNW9 492 aaKnown RBP8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 PLAGL2Q9UPG8 496 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 TRPC6Q9Y210 931 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 EPG5Q9HCE0 2579 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 KIAA1671Q9BY89 1806 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 PKD1L2Q7Z442 2459 aa8.01□□□□□ -1.13
RPUSD3-212ENST00000466141 DMDP11532 3685 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 RIF1Q5UIP0 2472 aaKnown RBP8□□□□□ -1.13
RPUSD3-212ENST00000466141 PROB1E7EW31 1015 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 GALR2O43603 387 aaPredicted RBP8□□□□□ -1.13
RPUSD3-212ENST00000466141 STAM2O75886 525 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 KRT37O76014 449 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 SNUPNO95149 360 aaKnown RBP8□□□□□ -1.13
RPUSD3-212ENST00000466141 GGPS1O95749 300 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 ITGB1P05556 798 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 GHRP10912 638 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 MYCLP12524 364 aaPredicted RBP8□□□□□ -1.13
RPUSD3-212ENST00000466141 UBA1P22314 1058 aaKnown RBP8□□□□□ -1.13
RPUSD3-212ENST00000466141 CCNCP24863 283 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 TPP2P29144 1249 aaPredicted RBP8□□□□□ -1.13
RPUSD3-212ENST00000466141 HOXC8P31273 242 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 ID4P47928 161 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 SP2Q02086 613 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 COASYQ13057 564 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 AP3B2Q13367 1082 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 BRD3Q15059 726 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 TAF11Q15544 211 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 MUM1Q2TAK8 710 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 CELF3Q5SZQ8 465 aaKnown RBP8□□□□□ -1.13
RPUSD3-212ENST00000466141 TTC19Q6DKK2 380 aaPredicted RBP8□□□□□ -1.13
RPUSD3-212ENST00000466141 XRRA1Q6P2D8 792 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 ERMP1Q7Z2K6 904 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 FRMD5Q7Z6J6 570 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 FERMT3Q86UX7 667 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 TRIM50Q86XT4 487 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 PEX5LQ8IYB4 626 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 EFHBQ8N7U6 833 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 NSUN7Q8NE18 718 aaKnown RBP8□□□□□ -1.13
RPUSD3-212ENST00000466141 ARMC2Q8NEN0 867 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 VN1R2Q8NFZ6 395 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 CRYGNQ8WXF5 182 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 ZBTB10Q96DT7 871 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 SLC39A13Q96H72 371 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 DHTKD1Q96HY7 919 aaPredicted RBP8□□□□□ -1.13
RPUSD3-212ENST00000466141 PPP1R9BQ96SB3 815 aa8□□□□□ -1.13
RPUSD3-212ENST00000466141 SLC39A3Q9BRY0 314 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms