RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 FAM109BQ6ICB4 259 aaPredicted RBP7.4□□□□□ -1.22
TPM3-214ENST00000466010 SV2AQ7L0J3 742 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 ADAT2Q7Z6V5 191 aaKnown RBP7.4□□□□□ -1.22
TPM3-214ENST00000466010 TLK2Q86UE8 772 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 PPFIBP1Q86W92 1011 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 MRPL41Q8IXM3 137 aaKnown RBP7.4□□□□□ -1.22
TPM3-214ENST00000466010 NCOA7Q8NI08 942 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 SCFD2Q8WU76 684 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 NUDT8Q8WV74 236 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 MTMR8Q96EF0 704 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 IWS1Q96ST2 819 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 ASPSCR1Q9BZE9 553 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 KATNBL1Q9H079 304 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 JPH1Q9HDC5 661 aaPredicted RBP7.4□□□□□ -1.22
TPM3-214ENST00000466010 PDLIM7Q9NR12 457 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 RAD18Q9NS91 495 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 NDOR1Q9UHB4 597 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 HIF3AQ9Y2N7 669 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 MRPL11Q9Y3B7 192 aaKnown RBP7.4□□□□□ -1.22
TPM3-214ENST00000466010 ZNFX1Q9P2E3 1918 aaKnown RBP7.4□□□□□ -1.23
TPM3-214ENST00000466010 ALPK3Q96L96 1907 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 SPDYE3A6NKU9 549 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 ARVCFO00192 962 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 NFIBO00712 420 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 SGSM2O43147 1006 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 OPA1O60313 960 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 PQBP1O60828 265 aaKnown RBP7.39□□□□□ -1.23
TPM3-214ENST00000466010 SCGB1D2O95969 90 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 ASLP04424 464 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 ASGR1P07306 291 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 POU3F2P20265 443 aaPredicted RBP7.39□□□□□ -1.23
TPM3-214ENST00000466010 EDNRBP24530 442 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 KIF5BP33176 963 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 MAP2K3P46734 347 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 ALDH5A1P51649 535 aaPredicted RBP7.39□□□□□ -1.23
TPM3-214ENST00000466010 RPS6P62753 249 aaKnown RBP7.39□□□□□ -1.23
TPM3-214ENST00000466010 GABREP78334 506 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 FPGSQ05932 587 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 ITKQ08881 620 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 SUZ12Q15022 739 aaKnown RBP7.39□□□□□ -1.23
TPM3-214ENST00000466010 PPP2R5BQ15173 497 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 CDC37Q16543 378 aaPredicted RBP7.39□□□□□ -1.23
TPM3-214ENST00000466010 POMZP3Q6PJE2 187 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 CENPQQ7L2Z9 268 aaPredicted RBP7.39□□□□□ -1.23
TPM3-214ENST00000466010 FBXO11Q86XK2 927 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 CHPFQ8IZ52 775 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 ADGRF4Q8IZF3 695 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 MYO1HQ8N1T3 1032 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 TMTC2Q8N394 836 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 KCT2Q8NC54 265 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 ZNF507Q8TCN5 953 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 NSUN6Q8TEA1 469 aaKnown RBP7.39□□□□□ -1.23
TPM3-214ENST00000466010 MAP3K14Q99558 947 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 SMAD5Q99717 465 aaKnown RBP7.39□□□□□ -1.23
TPM3-214ENST00000466010 AMNQ9BXJ7 453 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 KLHL25Q9H0H3 589 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 TJP2Q9UDY2 1190 aa7.39□□□□□ -1.23
TPM3-214ENST00000466010 GDF2Q9UK05 429 aaPredicted RBP7.39□□□□□ -1.23
TPM3-214ENST00000466010 TMEM265A0A087WTH1 108 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 KLRF2D3W0D1 207 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 IFIT3O14879 490 aaKnown RBP7.38□□□□□ -1.23
TPM3-214ENST00000466010 ZBTB5O15062 677 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 DNAJC8O75937 253 aaPredicted RBP7.38□□□□□ -1.23
TPM3-214ENST00000466010 TIMP1P01033 207 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 MYL1P05976 194 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 CYP21A2P08686 494 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 SUPT20HL2P0C7V6 817 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 GOLGA8HP0CJ92 632 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 CALML3P27482 149 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 CDK7P50613 346 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 SNAP25P60880 206 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 SMAD3P84022 425 aaKnown RBP7.38□□□□□ -1.23
TPM3-214ENST00000466010 ID3Q02535 119 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 RING1Q06587 406 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 PPIGQ13427 754 aaKnown RBP eCLIP7.38□□□□□ -1.23
TPM3-214ENST00000466010 TTLL4Q14679 1199 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 STXBP2Q15833 593 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 USH1GQ495M9 461 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 BMP2KLQ5H9B9 411 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 PPM1JQ5JR12 505 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 ZBTB37Q5TC79 503 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 TAPT1Q6NXT6 567 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 KCNV1Q6PIU1 500 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 CATIPQ7Z7H3 387 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 SPATS2Q86XZ4 545 aaKnown RBP7.38□□□□□ -1.23
TPM3-214ENST00000466010 WFDC8Q8IUA0 241 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 MAP4K3Q8IVH8 894 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 TEX2Q8IWB9 1127 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 FBXO16Q8IX29 292 aaPredicted RBP7.38□□□□□ -1.23
TPM3-214ENST00000466010 TMEM192Q8IY95 271 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 TMEM199Q8N511 208 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 BVESQ8NE79 360 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 CLEC4DQ8WXI8 215 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 MAP4K1Q92918 833 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 BADQ92934 168 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 USP7Q93009 1102 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 LENG1Q96BZ8 264 aaPredicted RBP7.38□□□□□ -1.23
TPM3-214ENST00000466010 CHMP4CQ96CF2 233 aa7.38□□□□□ -1.23
TPM3-214ENST00000466010 WDR89Q96FK6 387 aaPredicted RBP7.38□□□□□ -1.23
TPM3-214ENST00000466010 LZTS2Q9BRK4 669 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms