RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CARNS1A5YM72 827 aa24.02■■□□□ 1.44
LIME1-203ENST00000465591 N4BP3O15049 544 aa24.02■■□□□ 1.44
LIME1-203ENST00000465591 NPTX2P47972 431 aa24.02■■□□□ 1.44
LIME1-203ENST00000465591 PEX3P56589 373 aa24.02■■□□□ 1.44
LIME1-203ENST00000465591 TMEM119Q4V9L6 283 aa24.02■■□□□ 1.44
LIME1-203ENST00000465591 ANKRD54Q6NXT1 300 aa24.02■■□□□ 1.44
LIME1-203ENST00000465591 APOL5Q9BWW9 433 aa24.02■■□□□ 1.44
LIME1-203ENST00000465591 S1PR5Q9H228 398 aa24.02■■□□□ 1.44
LIME1-203ENST00000465591 FOXD4L1Q9NU39 408 aa24.02■■□□□ 1.44
LIME1-203ENST00000465591 IRAK3Q9Y616 596 aa24.02■■□□□ 1.44
LIME1-203ENST00000465591 SFI1A8K8P3 1242 aa24.01■■□□□ 1.43
LIME1-203ENST00000465591 OR1G1P47890 313 aa24.01■■□□□ 1.43
LIME1-203ENST00000465591 SF3A1Q15459 793 aaKnown RBP24.01■■□□□ 1.43
LIME1-203ENST00000465591 PTPN14Q15678 1187 aa24.01■■□□□ 1.43
LIME1-203ENST00000465591 TAS1R3Q7RTX0 852 aa24.01■■□□□ 1.43
LIME1-203ENST00000465591 TAS1R1Q7RTX1 841 aa24.01■■□□□ 1.43
LIME1-203ENST00000465591 HACE1Q8IYU2 909 aa24.01■■□□□ 1.43
LIME1-203ENST00000465591 SNTG2Q9NY99 539 aa24.01■■□□□ 1.43
LIME1-203ENST00000465591 CACNG4Q9UBN1 327 aa24.01■■□□□ 1.43
LIME1-203ENST00000465591 CDH22Q9UJ99 828 aa24.01■■□□□ 1.43
LIME1-203ENST00000465591 FSD2A1L4K1 749 aa24■■□□□ 1.43
LIME1-203ENST00000465591 CCDC169A6NNP5 214 aa24■■□□□ 1.43
LIME1-203ENST00000465591 EFEMP2O95967 443 aa24■■□□□ 1.43
LIME1-203ENST00000465591 SSBP05455 408 aaKnown RBP eCLIP24■■□□□ 1.43
LIME1-203ENST00000465591 SYT1P21579 422 aa24■■□□□ 1.43
LIME1-203ENST00000465591 EFNA5P52803 228 aa24■■□□□ 1.43
LIME1-203ENST00000465591 SLC12A3P55017 1021 aa24■■□□□ 1.43
LIME1-203ENST00000465591 RAD51AP2Q09MP3 1159 aa24■■□□□ 1.43
LIME1-203ENST00000465591 RESTQ13127 1097 aa24■■□□□ 1.43
LIME1-203ENST00000465591 TMEM132AQ24JP5 1023 aa24■■□□□ 1.43
LIME1-203ENST00000465591 FAM173BQ6P4H8 233 aa24■■□□□ 1.43
LIME1-203ENST00000465591 CABP7Q86V35 215 aa24■■□□□ 1.43
LIME1-203ENST00000465591 SYT2Q8N9I0 419 aaPredicted RBP24■■□□□ 1.43
LIME1-203ENST00000465591 SUSD6Q92537 303 aa24■■□□□ 1.43
LIME1-203ENST00000465591 RABGGTAQ92696 567 aa24■■□□□ 1.43
LIME1-203ENST00000465591 PI4K2BG5E9Z4 385 aa23.99■■□□□ 1.43
LIME1-203ENST00000465591 LILRB3O75022 631 aa23.99■■□□□ 1.43
LIME1-203ENST00000465591 RECQL4O94761 1208 aa23.99■■□□□ 1.43
LIME1-203ENST00000465591 GUCY2CP25092 1073 aa23.99■■□□□ 1.43
LIME1-203ENST00000465591 RNF168Q8IYW5 571 aaPredicted RBP23.99■■□□□ 1.43
LIME1-203ENST00000465591 C11orf16Q9NQ32 467 aa23.99■■□□□ 1.43
LIME1-203ENST00000465591 ARHGAP28Q9P2N2 729 aa23.99■■□□□ 1.43
LIME1-203ENST00000465591 CLIC4Q9Y696 253 aa23.99■■□□□ 1.43
LIME1-203ENST00000465591 ZMYM2Q9UBW7 1377 aa23.99■■□□□ 1.43
LIME1-203ENST00000465591 NPHP3-ACAD11A0A0J9YXS1 232 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 K7ELQ4 463 aaPredicted RBP23.98■■□□□ 1.43
LIME1-203ENST00000465591 K7ERI5 159 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 PTGESO14684 152 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 PLA2G4BP0C869 781 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 EPCAMP16422 314 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 PDCP20941 246 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 GRIK3Q13003 919 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 ATF7IP2Q5U623 682 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 FEZF2Q8TBJ5 459 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 SLC22A17Q8WUG5 538 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 INTS4Q96HW7 963 aaKnown RBP23.98■■□□□ 1.43
LIME1-203ENST00000465591 AK8Q96MA6 479 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 DRC1Q96MC2 740 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 PAAF1Q9BRP4 392 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 NT5C3AQ9H0P0 336 aa23.98■■□□□ 1.43
LIME1-203ENST00000465591 SOD2P04179 222 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 PLXNA3P51805 1871 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 CACNB1Q02641 598 aaPredicted RBP23.97■■□□□ 1.43
LIME1-203ENST00000465591 DMP1Q13316 513 aaPredicted RBP23.97■■□□□ 1.43
LIME1-203ENST00000465591 BMS1Q14692 1282 aaKnown RBP23.97■■□□□ 1.43
LIME1-203ENST00000465591 PTPAQ15257 358 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 ARSHQ5FYA8 562 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 KANK3Q6NY19 840 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 PHLPP2Q6ZVD8 1323 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 CASP10Q92851 521 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 CDK5RAP3Q96JB5 506 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 ADPGKQ9BRR6 497 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 HERC2P3Q9BVR0 1158 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 KMT5AQ9NQR1 393 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 GDAQ9Y2T3 454 aa23.97■■□□□ 1.43
LIME1-203ENST00000465591 SLC16A4O15374 487 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 BMP15O95972 392 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 CNPP09543 421 aaKnown RBP23.96■■□□□ 1.43
LIME1-203ENST00000465591 SRGAP2BP0DMP2 458 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 NAB2Q15742 525 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 KCTD17Q8N5Z5 321 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 CEP120Q8N960 986 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 KLHL5Q96PQ7 755 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 RPS6KC1Q96S38 1066 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 ACO2Q99798 780 aaKnown RBP23.96■■□□□ 1.43
LIME1-203ENST00000465591 TARS2Q9BW92 718 aaKnown RBP23.96■■□□□ 1.43
LIME1-203ENST00000465591 TMEM134Q9H6X4 195 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 BLOC1S4Q9NUP1 217 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 MTMR6Q9Y217 621 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 TNFSF13BQ9Y275 285 aa23.96■■□□□ 1.43
LIME1-203ENST00000465591 FAM86C2PA6NEL3 165 aa23.95■■□□□ 1.42
LIME1-203ENST00000465591 C2CD2LO14523 706 aa23.95■■□□□ 1.42
LIME1-203ENST00000465591 GIT2Q14161 759 aa23.95■■□□□ 1.42
LIME1-203ENST00000465591 KARSQ15046 597 aaKnown RBP23.95■■□□□ 1.42
LIME1-203ENST00000465591 DCAF4L1Q3SXM0 396 aa23.95■■□□□ 1.42
LIME1-203ENST00000465591 USP49Q70CQ1 688 aa23.95■■□□□ 1.42
LIME1-203ENST00000465591 C12orf76Q8N812 135 aaPredicted RBP23.95■■□□□ 1.42
LIME1-203ENST00000465591 B3GALT6Q96L58 329 aa23.95■■□□□ 1.42
LIME1-203ENST00000465591 POP1Q99575 1024 aaKnown RBP23.95■■□□□ 1.42
LIME1-203ENST00000465591 TIPINQ9BVW5 301 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms