RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 GRAMD1CQ8IYS0 662 aa22.3■■□□□ 1.16
SKA3-205ENST00000465471 CDT1Q9H211 546 aa22.3■■□□□ 1.16
SKA3-205ENST00000465471 TYW1Q9NV66 732 aaKnown RBP22.3■■□□□ 1.16
SKA3-205ENST00000465471 GIT1Q9Y2X7 761 aa22.3■■□□□ 1.16
SKA3-205ENST00000465471 LPXNO60711 386 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 MYL1P05976 194 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 AFMP43652 599 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 AFF1P51825 1210 aaKnown RBP22.29■■□□□ 1.16
SKA3-205ENST00000465471 CSPP1Q1MSJ5 1256 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 ZC2HC1CQ53FD0 456 aaPredicted RBP22.29■■□□□ 1.16
SKA3-205ENST00000465471 NOMO2Q5JPE7 1267 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 MPZL3Q6UWV2 235 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 KRBA2Q6ZNG9 492 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 UNC13DQ70J99 1090 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 HACE1Q8IYU2 909 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 FMR1NBQ8N0W7 255 aaPredicted RBP22.29■■□□□ 1.16
SKA3-205ENST00000465471 ENGASEQ8NFI3 743 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 PLVAPQ9BX97 442 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 FGFBP2Q9BYJ0 223 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 BLZF1Q9H2G9 400 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 MRPL44Q9H9J2 332 aaKnown RBP22.29■■□□□ 1.16
SKA3-205ENST00000465471 MTUS1Q9ULD2 1270 aa22.29■■□□□ 1.16
SKA3-205ENST00000465471 PVALEFA0A1B0GWK0 134 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 ZNF202O95125 648 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 RB1P06400 928 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 MCF2P10911 925 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 CTNNB1P35222 781 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 CASP5P51878 434 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 SNW1Q13573 536 aaKnown RBP22.28■■□□□ 1.16
SKA3-205ENST00000465471 ADGRE1Q14246 886 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 ZNF568Q3ZCX4 644 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 CLEC17AQ6ZS10 378 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 APBB1IPQ7Z5R6 666 aaPredicted RBP22.28■■□□□ 1.16
SKA3-205ENST00000465471 GSTCDQ8NEC7 633 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 FBXO22Q8NEZ5 403 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 TBC1D13Q9NVG8 400 aa22.28■■□□□ 1.16
SKA3-205ENST00000465471 TDRD15B5MCY1 1934 aaKnown RBP22.27■■□□□ 1.16
SKA3-205ENST00000465471 GOLGA6L4A6NEF3 574 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 ARL5CA6NH57 179 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 H3BNC9 293 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 RFXAPO00287 272 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 KLRC4O43908 158 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 POU3F3P20264 500 aaPredicted RBP22.27■■□□□ 1.16
SKA3-205ENST00000465471 AKAP5P24588 427 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 MLH1P40692 756 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 MCL1Q07820 350 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 ALCAMQ13740 583 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 SLC39A4Q6P5W5 647 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 GDPD5Q8WTR4 605 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 MYLIPQ8WY64 445 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 P2RX5Q93086 422 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 ZBTB45Q96K62 511 aaPredicted RBP22.27■■□□□ 1.16
SKA3-205ENST00000465471 HAPLN2Q9GZV7 340 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 SNTG2Q9NY99 539 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 TBC1D7Q9P0N9 293 aa22.27■■□□□ 1.16
SKA3-205ENST00000465471 ATG2AQ2TAZ0 1938 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 HNRNPDLO14979 420 aaKnown RBP22.26■■□□□ 1.15
SKA3-205ENST00000465471 GTPBP6O43824 516 aaPredicted RBP22.26■■□□□ 1.15
SKA3-205ENST00000465471 MYBP10242 640 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 LAG3P18627 525 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 GRM5P41594 1212 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 FAM160A1Q05DH4 1040 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 NOLC1Q14978 699 aaKnown RBP eCLIP22.26■■□□□ 1.15
SKA3-205ENST00000465471 TPRNQ4KMQ1 711 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 L1TD1Q5T7N2 865 aaKnown RBP22.26■■□□□ 1.15
SKA3-205ENST00000465471 CEP120Q8N960 986 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 COLGALT1Q8NBJ5 622 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 URGCPQ8TCY9 931 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 ZFP42Q96MM3 310 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 GAD1Q99259 594 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 APOL6Q9BWW8 343 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 KANSL3Q9P2N6 904 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 INPP5FQ9Y2H2 1132 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 STYXL1Q9Y6J8 313 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 PLXNA4Q9HCM2 1894 aa22.26■■□□□ 1.15
SKA3-205ENST00000465471 B4GALT3O60512 393 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 RECQL4O94761 1208 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 GCNT3O95395 438 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 LIG4P49917 911 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 KCNA1Q09470 495 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 FAM26FQ5R3K3 315 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 EPM2AIP1Q7L775 607 aaPredicted RBP22.25■■□□□ 1.15
SKA3-205ENST00000465471 GLIS3Q8NEA6 775 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 HPS3Q969F9 1004 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 BICD1Q96G01 975 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 C11orf84Q9BUA3 381 aaPredicted RBP22.25■■□□□ 1.15
SKA3-205ENST00000465471 AAASQ9NRG9 546 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 MIOSQ9NXC5 875 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 ANKFY1Q9P2R3 1169 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 PCDHB13Q9Y5F0 798 aa22.25■■□□□ 1.15
SKA3-205ENST00000465471 CLDN3O15551 220 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 FAM189A1O60320 539 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 GADD45BO75293 160 aaPredicted RBP22.24■■□□□ 1.15
SKA3-205ENST00000465471 PRR29P0C7W0 189 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 SCNN1GP51170 649 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 DSC1Q08554 894 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 ZBTB33Q86T24 672 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 ACCSQ96QU6 501 aa22.24■■□□□ 1.15
SKA3-205ENST00000465471 GAS2L1Q99501 681 aaPredicted RBP22.24■■□□□ 1.15
SKA3-205ENST00000465471 TCHPQ9BT92 498 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms