RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CHRNB2P17787 502 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 CDR1P51861 262 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 DRG2P55039 364 aaKnown RBP19.7■□□□□ 0.74
SYNE4-204ENST00000465425 MAP3K10Q02779 954 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 USP37Q86T82 979 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 NIM1KQ8IY84 436 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 SAMD3Q8N6K7 520 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 OTUD6BQ8N6M0 293 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 SHC3Q92529 594 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 NUP85Q9BW27 656 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 ACP6Q9NPH0 428 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 ANKEF1Q9NU02 776 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 SCAF8Q9UPN6 1271 aaKnown RBP19.7■□□□□ 0.74
SYNE4-204ENST00000465425 TRPC6Q9Y210 931 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 USP20Q9Y2K6 914 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 PODXLO00592 558 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 ATP9AO75110 1047 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 MTA2O94776 668 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 CPP00450 1065 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 ADSSP30520 456 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 GBP1P32455 592 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 PPARDQ03181 441 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 ARHGEF16Q5VV41 709 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 MAP4K3Q8IVH8 894 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 TMEM161BQ8NDZ6 487 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 PARD3BQ8TEW8 1205 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 KIFC3Q9BVG8 833 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 KIAA1683Q9H0B3 1180 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 TMEM8AQ9HCN3 771 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 MTUS1Q9ULD2 1270 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 ZNRF3Q9ULT6 936 aa19.7■□□□□ 0.74
SYNE4-204ENST00000465425 DENND3A2RUS2 1198 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 ANKRD63C9JTQ0 380 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 KIAA0391O15091 583 aaKnown RBP19.69■□□□□ 0.74
SYNE4-204ENST00000465425 MEFVO15553 781 aaPredicted RBP19.69■□□□□ 0.74
SYNE4-204ENST00000465425 CYP11B1P15538 503 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 TMOD1P28289 359 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 NPTX2P47972 431 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PMS2P54278 862 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 FMO1Q01740 532 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 DENND2CQ68D51 928 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 CCDC137Q6PK04 289 aaKnown RBP19.69■□□□□ 0.74
SYNE4-204ENST00000465425 NSMFQ6X4W1 530 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 RNF207Q6ZRF8 634 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PRELID2Q8N945 189 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 FBXO25Q8TCJ0 367 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 KIFAP3Q92845 792 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 SEMA4DQ92854 862 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 ZNF653Q96CK0 615 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 NT5C1BQ96P26 610 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PAGR1Q9BTK6 254 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 TXLNGYQ9BZA5 131 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 KMT5AQ9NQR1 393 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PARP2Q9UGN5 583 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PCYOX1Q9UHG3 505 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PGAP2Q9UHJ9 254 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 GMNCA6NCL1 334 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 CTNNA2P26232 953 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PEX5P50542 639 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 DGKZQ13574 1117 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 FBXL13Q8NEE6 735 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 HVCN1Q96D96 273 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PDCD2LQ9BRP1 358 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PABPC3Q9H361 631 aaKnown RBP19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PXMP2Q9NR77 195 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 MTRF1LQ9UGC7 380 aaKnown RBP19.69■□□□□ 0.74
SYNE4-204ENST00000465425 GTF3C4Q9UKN8 822 aa19.69■□□□□ 0.74
SYNE4-204ENST00000465425 PHF20L1A8MW92 1017 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 CCNE2O96020 404 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 GPC3P51654 580 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 CCDC105Q8IYK2 499 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 POMGNT1Q8WZA1 660 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 POP1Q99575 1024 aaKnown RBP19.68■□□□□ 0.74
SYNE4-204ENST00000465425 ZBED4O75132 1171 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 PYGMP11217 842 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 CDR2Q01850 454 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 OTUD6AQ7L8S5 288 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 NLRX1Q86UT6 975 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 BTBD6Q96KE9 485 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 TAOK3Q9H2K8 898 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 RAB20Q9NX57 234 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 STK32BQ9NY57 414 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 UVRAGQ9P2Y5 699 aa19.68■□□□□ 0.74
SYNE4-204ENST00000465425 DCDC2CA8MYV0 355 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 TRAPPC3O43617 180 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 CYP1A2P05177 515 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 NUDT17P0C025 328 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 PTGIRP43119 386 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 ANO5Q75V66 913 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 HELQQ8TDG4 1101 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 CD101Q93033 1021 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 RUNDC3BQ96NL0 473 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 CNOT10Q9H9A5 744 aaKnown RBP19.67■□□□□ 0.74
SYNE4-204ENST00000465425 PNMA2Q9UL42 364 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 COQ4Q9Y3A0 265 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 COL4A5P29400 1685 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 DLATP10515 647 aaKnown RBP19.67■□□□□ 0.74
SYNE4-204ENST00000465425 ZDHHC24Q6UX98 284 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 TAS1R2Q8TE23 839 aa19.67■□□□□ 0.74
SYNE4-204ENST00000465425 CYFIP2Q96F07 1278 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms