RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ZNF507Q8TCN5 953 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 MRPL9Q9BYD2 267 aaKnown RBP18.56■□□□□ 0.56
USP39-211ENST00000465282 RSAD1Q9HA92 442 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 RMND1Q9NWS8 449 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 KANSL3Q9P2N6 904 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 RWDD3Q9Y3V2 267 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 TDRD15B5MCY1 1934 aaKnown RBP18.55■□□□□ 0.56
USP39-211ENST00000465282 INPPL1O15357 1258 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 RHOBTB3O94955 611 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 SMC2O95347 1197 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 FGFR1P11362 822 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 MYOGP15173 224 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 IBSPP21815 317 aaPredicted RBP18.55■□□□□ 0.56
USP39-211ENST00000465282 FXR1P51114 621 aaKnown RBP eCLIP18.55■□□□□ 0.56
USP39-211ENST00000465282 SNRPFP62306 86 aaKnown RBP18.55■□□□□ 0.56
USP39-211ENST00000465282 MCL1Q07820 350 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 NOLC1Q14978 699 aaKnown RBP eCLIP18.55■□□□□ 0.56
USP39-211ENST00000465282 KMT5BQ4FZB7 885 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 CLLU1OSQ5K130 101 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 PPP2R2DQ66LE6 453 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 AGMOQ6ZNB7 445 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 EPM2AIP1Q7L775 607 aaPredicted RBP18.55■□□□□ 0.56
USP39-211ENST00000465282 CDR2LQ86X02 465 aaPredicted RBP18.55■□□□□ 0.56
USP39-211ENST00000465282 CLP1Q92989 425 aaKnown RBP18.55■□□□□ 0.56
USP39-211ENST00000465282 LRCH3Q96II8 777 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 CASD1Q96PB1 797 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 GSDMAQ96QA5 445 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 CDT1Q9H211 546 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 NKX2-4Q9H2Z4 354 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 RNF19AQ9NV58 838 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 USP20Q9Y2K6 914 aa18.55■□□□□ 0.56
USP39-211ENST00000465282 LINC01553A4QN01 128 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 TBKBP1A7MCY6 615 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 ABLIM1O14639 778 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 OFD1O75665 1012 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 KIF20AO95235 890 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 MYBP10242 640 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 GRM5P41594 1212 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 CASP5P51878 434 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 TAP1Q03518 808 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 NOMO2Q5JPE7 1267 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 ZNF697Q5TEC3 545 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 SYCP3Q8IZU3 236 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 LRRC43Q8N309 656 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 SPATA20Q8TB22 786 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 URGCPQ8TCY9 931 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 CCDC94Q9BW85 323 aaPredicted RBP18.54■□□□□ 0.56
USP39-211ENST00000465282 NXF3Q9H4D5 531 aaKnown RBP18.54■□□□□ 0.56
USP39-211ENST00000465282 LMBRD1Q9NUN5 540 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 STYXL1Q9Y6J8 313 aa18.54■□□□□ 0.56
USP39-211ENST00000465282 TRIP11Q15643 1979 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 A0A0B4J269 797 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 LCHNA4D1U4 455 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 PRR29P0C7W0 189 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 MATR3P43243 847 aaKnown RBP eCLIP18.53■□□□□ 0.56
USP39-211ENST00000465282 ERVK-21P61565 698 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 POU5F1Q01860 360 aaKnown RBP18.53■□□□□ 0.56
USP39-211ENST00000465282 BMT2Q1RMZ1 405 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 HELQQ8TDG4 1101 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 LPPQ93052 612 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 HPS3Q969F9 1004 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 TGS1Q96RS0 853 aaKnown RBP18.53■□□□□ 0.56
USP39-211ENST00000465282 ZNF576Q9H609 170 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 SLC39A2Q9NP94 309 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 AAASQ9NRG9 546 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 TOPORSQ9NS56 1045 aaPredicted RBP18.53■□□□□ 0.56
USP39-211ENST00000465282 CGNQ9P2M7 1197 aaKnown RBP18.53■□□□□ 0.56
USP39-211ENST00000465282 ANKFY1Q9P2R3 1169 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 HES2Q9Y543 173 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 KIAA1671Q9BY89 1806 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 CHD7Q9P2D1 2997 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 TRANK1O15050 2925 aa18.53■□□□□ 0.56
USP39-211ENST00000465282 KIAA0391O15091 583 aaKnown RBP18.52■□□□□ 0.56
USP39-211ENST00000465282 PRPF6O94906 941 aaKnown RBP18.52■□□□□ 0.56
USP39-211ENST00000465282 RB1P06400 928 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 YARSP54577 528 aaKnown RBP18.52■□□□□ 0.56
USP39-211ENST00000465282 PNOCQ13519 176 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 ZBTB33Q86T24 672 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 SCFD1Q8WVM8 642 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 SMARCE1Q969G3 411 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 ZBTB45Q96K62 511 aaPredicted RBP18.52■□□□□ 0.56
USP39-211ENST00000465282 ACAP3Q96P50 834 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 FGFBP2Q9BYJ0 223 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 RNF39Q9H2S5 420 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 SNTG2Q9NY99 539 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 PARP2Q9UGN5 583 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 MYO9BQ13459 2157 aa18.52■□□□□ 0.56
USP39-211ENST00000465282 ARL5CA6NH57 179 aa18.51■□□□□ 0.55
USP39-211ENST00000465282 MEIS3P2A8K0S8 358 aa18.51■□□□□ 0.55
USP39-211ENST00000465282 OGTO15294 1046 aa18.51■□□□□ 0.55
USP39-211ENST00000465282 RECQL4O94761 1208 aa18.51■□□□□ 0.55
USP39-211ENST00000465282 CLTAP09496 248 aa18.51■□□□□ 0.55
USP39-211ENST00000465282 GARTP22102 1010 aa18.51■□□□□ 0.55
USP39-211ENST00000465282 KCNA1Q09470 495 aa18.51■□□□□ 0.55
USP39-211ENST00000465282 STK4Q13043 487 aa18.51■□□□□ 0.55
USP39-211ENST00000465282 HSP90AA2PQ14568 343 aaPredicted RBP18.51■□□□□ 0.55
USP39-211ENST00000465282 PAN2Q504Q3 1202 aaKnown RBP18.51■□□□□ 0.55
USP39-211ENST00000465282 SLC39A4Q6P5W5 647 aa18.51■□□□□ 0.55
USP39-211ENST00000465282 GOLGA5Q8TBA6 731 aa18.51■□□□□ 0.55
USP39-211ENST00000465282 MSTO1Q9BUK6 570 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms