RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 ARMC9Q7Z3E5 817 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 TBX20Q9UMR3 447 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 STK38LQ9Y2H1 464 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 PARP4Q9UKK3 1724 aaKnown RBP13.72□□□□□ -0.21
NFXL1-203ENST00000464756 CAPN9O14815 690 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 RASGRF2O14827 1237 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 YWHAGP61981 247 aaKnown RBP eCLIP13.72□□□□□ -0.21
NFXL1-203ENST00000464756 DLG4P78352 724 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 CCNA1P78396 465 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 LRRC14Q15048 493 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 TMED2Q15363 201 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 FIGNQ5HY92 759 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 MMS22LQ6ZRQ5 1243 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 MAIP1Q8WWC4 291 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 TLR10Q9BXR5 811 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 TMEM117Q9H0C3 514 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 MMEP08473 750 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 PSMA2P25787 234 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 NEDD9Q14511 834 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 SCYL3Q8IZE3 742 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 MKL1Q969V6 931 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 FBXO40Q9UH90 709 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 HPCAL4Q9UM19 191 aa13.72□□□□□ -0.21
NFXL1-203ENST00000464756 HLA-DRAP01903 254 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 GLI1P08151 1106 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 GKAP1Q5VSY0 366 aaPredicted RBP13.71□□□□□ -0.21
NFXL1-203ENST00000464756 ALS2CLQ60I27 953 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 MOXD1Q6UVY6 613 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 DLK2Q6UY11 383 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 NME8Q8N427 588 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 OR6B3Q8NGW1 331 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 HOMER3Q9NSC5 361 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 ZBTB22O15209 634 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 YWHAEP62258 255 aaKnown RBP13.71□□□□□ -0.21
NFXL1-203ENST00000464756 SLC47A2Q86VL8 602 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 TPCN2Q8NHX9 752 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 SPIRE2Q8WWL2 714 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 BAIAP2L1Q9UHR4 511 aa13.71□□□□□ -0.21
NFXL1-203ENST00000464756 GRID2IPA4D2P6 1211 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 GRAP2O75791 330 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 PBX1P40424 430 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 JAG1P78504 1218 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 CCDC6Q16204 474 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 PAPD7Q5XG87 772 aaKnown RBP13.71□□□□□ -0.22
NFXL1-203ENST00000464756 USP38Q8NB14 1042 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 KCTD6Q8NC69 237 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 GRK7Q8WTQ7 553 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 ZIM3Q96PE6 472 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 HEY1Q9Y5J3 304 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 SYNGAP1Q96PV0 1343 aa13.71□□□□□ -0.22
NFXL1-203ENST00000464756 F8VZ95 297 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 EIF3DO15371 548 aaKnown RBP eCLIP13.7□□□□□ -0.22
NFXL1-203ENST00000464756 ATP5DP30049 168 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 HOXA7P31268 230 aaPredicted RBP13.7□□□□□ -0.22
NFXL1-203ENST00000464756 ATP11AP98196 1134 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 CUL1Q13616 776 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 NCOA4Q13772 614 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 ZRSR2Q15696 482 aaKnown RBP13.7□□□□□ -0.22
NFXL1-203ENST00000464756 GLE1Q53GS7 698 aaKnown RBP13.7□□□□□ -0.22
NFXL1-203ENST00000464756 TMEM35BQ8NCS4 154 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 MMP19Q99542 508 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.7□□□□□ -0.22
NFXL1-203ENST00000464756 BCL9LQ86UU0 1499 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 MIF4GDA9UHW6 222 aaKnown RBP13.7□□□□□ -0.22
NFXL1-203ENST00000464756 GIMAP7Q8NHV1 300 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 ETNPPLQ8TBG4 499 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 LRRC15Q8TF66 581 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 ATG4AQ8WYN0 398 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 TATDN2Q93075 761 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 MIS12Q9H081 205 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 AGO4Q9HCK5 861 aaKnown RBP13.7□□□□□ -0.22
NFXL1-203ENST00000464756 NUB1Q9Y5A7 615 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 SNHG28P0DPA3 235 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 SAT1P21673 171 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 SETDB1Q15047 1291 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 PGM5Q15124 567 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 CLUL1Q15846 466 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 ZBTB45Q96K62 511 aaPredicted RBP13.7□□□□□ -0.22
NFXL1-203ENST00000464756 PXMP2Q9NR77 195 aa13.7□□□□□ -0.22
NFXL1-203ENST00000464756 SUCLA2Q9P2R7 463 aaPredicted RBP13.7□□□□□ -0.22
NFXL1-203ENST00000464756 LDHAP00338 332 aaKnown RBP13.69□□□□□ -0.22
NFXL1-203ENST00000464756 PRKCBP05771 671 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 VIL1P09327 827 aaKnown RBP13.69□□□□□ -0.22
NFXL1-203ENST00000464756 CLCN3P51790 818 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 MEA1Q16626 185 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 TRAPPC12Q8WVT3 735 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 ARL8AQ96BM9 186 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 COMMD10Q9Y6G5 202 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 VWA5AO00534 786 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 DDX3XO00571 662 aaKnown RBP eCLIP13.69□□□□□ -0.22
NFXL1-203ENST00000464756 ZNF263O14978 683 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 RTN2O75298 545 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 SEC24CP53992 1094 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 SV2AQ7L0J3 742 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 APTXQ7Z2E3 356 aaKnown RBP13.69□□□□□ -0.22
NFXL1-203ENST00000464756 C9orf72Q96LT7 481 aa13.69□□□□□ -0.22
NFXL1-203ENST00000464756 MRPL4Q9BYD3 311 aaKnown RBP13.69□□□□□ -0.22
NFXL1-203ENST00000464756 CYP26B1Q9NR63 512 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms