RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 ERCC4Q92889 916 aaPredicted RBP20.76■□□□□ 0.91
LMNB1-204ENST00000463908 HVCN1Q96D96 273 aa20.76■□□□□ 0.91
LMNB1-204ENST00000463908 PGBD4Q96DM1 585 aa20.76■□□□□ 0.91
LMNB1-204ENST00000463908 CDT1Q9H211 546 aa20.76■□□□□ 0.91
LMNB1-204ENST00000463908 SLC39A2Q9NP94 309 aa20.76■□□□□ 0.91
LMNB1-204ENST00000463908 LINC01553A4QN01 128 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 TBKBP1A7MCY6 615 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 TISP43B9A030 160 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 ITGA4P13612 1032 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 AKAP5P24588 427 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 ABCD1P33897 745 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 MPZL3Q6UWV2 235 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 LRRC55Q6ZSA7 311 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 HELQQ8TDG4 1101 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 SCFD1Q8WVM8 642 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 ACCSQ96QU6 501 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 ADPGKQ9BRR6 497 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 TCHPQ9BT92 498 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 TRIM6Q9C030 488 aaPredicted RBP20.75■□□□□ 0.91
LMNB1-204ENST00000463908 TMEM117Q9H0C3 514 aa20.75■□□□□ 0.91
LMNB1-204ENST00000463908 TTYH1Q9H313 450 aaPredicted RBP20.75■□□□□ 0.91
LMNB1-204ENST00000463908 KINO60870 393 aaKnown RBP20.74■□□□□ 0.91
LMNB1-204ENST00000463908 MCL1Q07820 350 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 PSMD2Q13200 908 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 ALCAMQ13740 583 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 BTG3Q14201 252 aaPredicted RBP20.74■□□□□ 0.91
LMNB1-204ENST00000463908 PAN2Q504Q3 1202 aaKnown RBP20.74■□□□□ 0.91
LMNB1-204ENST00000463908 CMTR2Q8IYT2 770 aaKnown RBP20.74■□□□□ 0.91
LMNB1-204ENST00000463908 CEP120Q8N960 986 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 SPATA20Q8TB22 786 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 GBF1Q92538 1859 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 BICD1Q96G01 975 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 APOL6Q9BWW8 343 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 CXCL16Q9H2A7 254 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 SLC28A3Q9HAS3 691 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 MIOSQ9NXC5 875 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 SNTG2Q9NY99 539 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 PCDHA5Q9Y5H7 936 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 STYXL1Q9Y6J8 313 aa20.74■□□□□ 0.91
LMNB1-204ENST00000463908 VCANP13611 3396 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 CLDN3O15551 220 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 HOXA2O43364 376 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 RHOBTB3O94955 611 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 MCF2P10911 925 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 ADSSP30520 456 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 LIG4P49917 911 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 KCNB1Q14721 858 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 DCAF4L1Q3SXM0 396 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 ZNF568Q3ZCX4 644 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 TMEM192Q8IY95 271 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 FIBCD1Q8N539 461 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 KIAA0895Q8NCT3 520 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 GSTCDQ8NEC7 633 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 SEMA6BQ9H3T3 888 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 RSAD1Q9HA92 442 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 TYW1Q9NV66 732 aaKnown RBP20.73■□□□□ 0.91
LMNB1-204ENST00000463908 EXOC1Q9NV70 894 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 HCSTQ9UBK5 93 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 STXBP5LQ9Y2K9 1186 aa20.73■□□□□ 0.91
LMNB1-204ENST00000463908 MRPL42Q9Y6G3 142 aaKnown RBP20.73■□□□□ 0.91
LMNB1-204ENST00000463908 A0A0B4J269 797 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 HNRNPDLO14979 420 aaKnown RBP20.72■□□□□ 0.91
LMNB1-204ENST00000463908 EIF3DO15371 548 aaKnown RBP eCLIP20.72■□□□□ 0.911e-6■■□□□ 13.3
LMNB1-204ENST00000463908 MEFVO15553 781 aaPredicted RBP20.72■□□□□ 0.91
LMNB1-204ENST00000463908 SEZ6Q53EL9 994 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 THNSL1Q8IYQ7 743 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 CCDC34Q96HJ3 373 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 GAD1Q99259 594 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 ZNF576Q9H609 170 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 CWH43Q9H720 699 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 UBN1Q9NPG3 1134 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 KLK14Q9P0G3 267 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 ANKFY1Q9P2R3 1169 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 PARP2Q9UGN5 583 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 GDAQ9Y2T3 454 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 GIT1Q9Y2X7 761 aa20.72■□□□□ 0.91
LMNB1-204ENST00000463908 ARL5CA6NH57 179 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 INPPL1O15357 1258 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 TGFB1I1O43294 461 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 FAM189A1O60320 539 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 GRM5P41594 1212 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 OSTNP61366 133 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 BMT2Q1RMZ1 405 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 NOMO2Q5JPE7 1267 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 PPP2R2DQ66LE6 453 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 GLB1LQ6UWU2 654 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 CLP1Q92989 425 aaKnown RBP20.71■□□□□ 0.91
LMNB1-204ENST00000463908 ZFP42Q96MM3 310 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 C17orf80Q9BSJ5 609 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 TMEM206Q9H813 350 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 CERS4Q9HA82 394 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 MTMR10Q9NXD2 777 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 EXOC7Q9UPT5 735 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 ZMYM2Q9UBW7 1377 aa20.71■□□□□ 0.91
LMNB1-204ENST00000463908 RECQL4O94761 1208 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 HARSP12081 509 aaKnown RBP20.7■□□□□ 0.9
LMNB1-204ENST00000463908 MLH1P40692 756 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 ERVK-21P61565 698 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 NOLC1Q14978 699 aaKnown RBP eCLIP20.7■□□□□ 0.9
LMNB1-204ENST00000463908 ZBTB41Q5SVQ8 909 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms