RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 UBE4BO95155 1302 aa21.68■■□□□ 1.06
COL9A3-204ENST00000463487 ZMYM2Q9UBW7 1377 aa21.68■■□□□ 1.06
COL9A3-204ENST00000463487 LINC01553A4QN01 128 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 TTLL13PA6NNM8 815 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 GADD45BO75293 160 aaPredicted RBP21.67■■□□□ 1.06
COL9A3-204ENST00000463487 PPP1R37O75864 691 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 KIF20AO95235 890 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 RPN1P04843 607 aaKnown RBP21.67■■□□□ 1.06
COL9A3-204ENST00000463487 EDN1P05305 212 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 CASP1P29466 404 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 YARSP54577 528 aaKnown RBP21.67■■□□□ 1.06
COL9A3-204ENST00000463487 NOMO2Q5JPE7 1267 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 SPOUT1Q5T280 376 aaKnown RBP21.67■■□□□ 1.06
COL9A3-204ENST00000463487 EEF1DP3Q658K8 133 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 ELOA2Q8IYF1 753 aaPredicted RBP21.67■■□□□ 1.06
COL9A3-204ENST00000463487 SMG8Q8ND04 991 aaKnown RBP21.67■■□□□ 1.06
COL9A3-204ENST00000463487 HELQQ8TDG4 1101 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 LPPQ93052 612 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 RPS6KC1Q96S38 1066 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 APOL6Q9BWW8 343 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 CDT1Q9H211 546 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 TOPORSQ9NS56 1045 aaPredicted RBP21.67■■□□□ 1.06
COL9A3-204ENST00000463487 RMND1Q9NWS8 449 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 PARP2Q9UGN5 583 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 USP20Q9Y2K6 914 aa21.67■■□□□ 1.06
COL9A3-204ENST00000463487 LCHNA4D1U4 455 aa21.66■■□□□ 1.06
COL9A3-204ENST00000463487 MYBP10242 640 aa21.66■■□□□ 1.06
COL9A3-204ENST00000463487 PROZP22891 400 aa21.66■■□□□ 1.06
COL9A3-204ENST00000463487 TAP1Q03518 808 aa21.66■■□□□ 1.06
COL9A3-204ENST00000463487 RNASELQ05823 741 aaKnown RBP21.66■■□□□ 1.06
COL9A3-204ENST00000463487 DPYDQ12882 1025 aa21.66■■□□□ 1.06
COL9A3-204ENST00000463487 CLLU1OSQ5K130 101 aa21.66■■□□□ 1.06
COL9A3-204ENST00000463487 ZBTB33Q86T24 672 aa21.66■■□□□ 1.06
COL9A3-204ENST00000463487 GTPBP4Q9BZE4 634 aaKnown RBP21.66■■□□□ 1.06
COL9A3-204ENST00000463487 PTPRHQ9HD43 1115 aa21.66■■□□□ 1.06
COL9A3-204ENST00000463487 INPP5FQ9Y2H2 1132 aa21.66■■□□□ 1.06
COL9A3-204ENST00000463487 HES2Q9Y543 173 aa21.66■■□□□ 1.06
COL9A3-204ENST00000463487 HARSP12081 509 aaKnown RBP21.65■■□□□ 1.06
COL9A3-204ENST00000463487 GRM5P41594 1212 aa21.65■■□□□ 1.06
COL9A3-204ENST00000463487 MCL1Q07820 350 aa21.65■■□□□ 1.06
COL9A3-204ENST00000463487 EHHADHQ08426 723 aa21.65■■□□□ 1.06
COL9A3-204ENST00000463487 KMT5BQ4FZB7 885 aa21.65■■□□□ 1.06
COL9A3-204ENST00000463487 AGMOQ6ZNB7 445 aa21.65■■□□□ 1.06
COL9A3-204ENST00000463487 CASD1Q96PB1 797 aa21.65■■□□□ 1.06
COL9A3-204ENST00000463487 STRA6Q9BX79 667 aa21.65■■□□□ 1.06
COL9A3-204ENST00000463487 OFD1O75665 1012 aa21.64■■□□□ 1.05
COL9A3-204ENST00000463487 PRR29P0C7W0 189 aa21.64■■□□□ 1.05
COL9A3-204ENST00000463487 LAG3P18627 525 aa21.64■■□□□ 1.05
COL9A3-204ENST00000463487 GATMP50440 423 aa21.64■■□□□ 1.05
COL9A3-204ENST00000463487 CASP5P51878 434 aa21.64■■□□□ 1.05
COL9A3-204ENST00000463487 HSP90AA2PQ14568 343 aaPredicted RBP21.64■■□□□ 1.05
COL9A3-204ENST00000463487 KCNB1Q14721 858 aa21.64■■□□□ 1.05
COL9A3-204ENST00000463487 CLP1Q92989 425 aaKnown RBP21.64■■□□□ 1.05
COL9A3-204ENST00000463487 FAM193BQ96PV7 902 aaPredicted RBP21.64■■□□□ 1.05
COL9A3-204ENST00000463487 RNF19AQ9NV58 838 aa21.64■■□□□ 1.05
COL9A3-204ENST00000463487 LAMA3Q16787 3333 aa21.64■■□□□ 1.05
COL9A3-204ENST00000463487 FNDC1Q4ZHG4 1894 aaPredicted RBP21.64■■□□□ 1.05
COL9A3-204ENST00000463487 ARL5CA6NH57 179 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 KLRC4O43908 158 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 RECQL4O94761 1208 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 RHOBTB3O94955 611 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 AKAP5P24588 427 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 CTNNB1P35222 781 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 MLH1P40692 756 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 ERVK-21P61565 698 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 HS2ST1Q7LGA3 356 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 POMGNT1Q8WZA1 660 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 HPS3Q969F9 1004 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 SMARCE1Q969G3 411 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 ACAP3Q96P50 834 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 GSDMAQ96QA5 445 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 PLVAPQ9BX97 442 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 SLC39A2Q9NP94 309 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 SNTG2Q9NY99 539 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 GDAQ9Y2T3 454 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 PCDHB12Q9Y5F1 795 aa21.63■■□□□ 1.05
COL9A3-204ENST00000463487 MRPL42Q9Y6G3 142 aaKnown RBP21.63■■□□□ 1.05
COL9A3-204ENST00000463487 OGTO15294 1046 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 INPPL1O15357 1258 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 PRPF6O94906 941 aaKnown RBP21.62■■□□□ 1.05
COL9A3-204ENST00000463487 RB1P06400 928 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 SNRPFP62306 86 aaKnown RBP21.62■■□□□ 1.05
COL9A3-204ENST00000463487 PNOCQ13519 176 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 TMEM192Q8IY95 271 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 THNSL1Q8IYQ7 743 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 DEFB123Q8N688 67 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 FBXO22Q8NEZ5 403 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 ZNF507Q8TCN5 953 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 ARNTL2Q8WYA1 636 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 ZBTB45Q96K62 511 aaPredicted RBP21.62■■□□□ 1.05
COL9A3-204ENST00000463487 GAD1Q99259 594 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 MSTO1Q9BUK6 570 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 GBP3Q9H0R5 595 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 SEMA6BQ9H3T3 888 aa21.62■■□□□ 1.05
COL9A3-204ENST00000463487 TYW1Q9NV66 732 aaKnown RBP21.62■■□□□ 1.05
COL9A3-204ENST00000463487 RALGAPA2Q2PPJ7 1873 aa21.61■■□□□ 1.05
COL9A3-204ENST00000463487 A0A0B4J269 797 aa21.61■■□□□ 1.05
COL9A3-204ENST00000463487 MEIS3P2A8K0S8 358 aa21.61■■□□□ 1.05
COL9A3-204ENST00000463487 ABLIM1O14639 778 aa21.61■■□□□ 1.05
COL9A3-204ENST00000463487 KIAA0391O15091 583 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms