RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 PIK3C3Q8NEB9 887 aa1.9□□□□□ -2.11
TMEM56-204ENST00000463375 SEMA6DQ8NFY4 1073 aa1.9□□□□□ -2.11
TMEM56-204ENST00000463375 ZNF669Q96BR6 464 aaPredicted RBP1.9□□□□□ -2.11
TMEM56-204ENST00000463375 AIFM2Q9BRQ8 373 aa1.9□□□□□ -2.11
TMEM56-204ENST00000463375 HIRIP3Q9BW71 556 aaPredicted RBP1.9□□□□□ -2.11
TMEM56-204ENST00000463375 KRTAP4-3Q9BYR4 195 aa1.9□□□□□ -2.11
TMEM56-204ENST00000463375 SEMA4CQ9C0C4 833 aa1.9□□□□□ -2.11
TMEM56-204ENST00000463375 SPON1Q9HCB6 807 aa1.9□□□□□ -2.11
TMEM56-204ENST00000463375 IL17RBQ9NRM6 502 aa1.9□□□□□ -2.11
TMEM56-204ENST00000463375 TMEM74BQ9NUR3 256 aa1.9□□□□□ -2.11
TMEM56-204ENST00000463375 TBCCD1Q9NVR7 557 aa1.9□□□□□ -2.11
TMEM56-204ENST00000463375 USP15Q9Y4E8 981 aaPredicted RBP1.9□□□□□ -2.11
TMEM56-204ENST00000463375 FAM221BA6H8Z2 402 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 MAFGO15525 162 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 OPHN1O60890 802 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 CRTAMO95727 393 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 ELANEP08246 267 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 SNHG28P0DPA3 235 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 ZBTB48P10074 688 aaPredicted RBP1.89□□□□□ -2.11
TMEM56-204ENST00000463375 KELP23276 732 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 VAMP1P23763 118 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 SOX10P56693 466 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 GABREP78334 506 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 LAMB3Q13751 1172 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 DDR2Q16832 855 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 PRAMEF9Q5VWM5 478 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 SLC9A4Q6AI14 798 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 USP43Q70EL4 1123 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 RHOT2Q8IXI1 618 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 ARMC5Q96C12 935 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 BOCQ9BWV1 1114 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 MTG2Q9H4K7 406 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 INTS7Q9NVH2 962 aaKnown RBP1.89□□□□□ -2.11
TMEM56-204ENST00000463375 KCTD5Q9NXV2 234 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 PCDHA9Q9Y5H5 950 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 AOX1Q06278 1338 aa1.89□□□□□ -2.11
TMEM56-204ENST00000463375 IGKV2D-30A0A075B6S6 120 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 SSBP05455 408 aaKnown RBP eCLIP1.88□□□□□ -2.11
TMEM56-204ENST00000463375 ETFBP38117 255 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 DUSP2Q05923 314 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 EPHA7Q15375 998 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 SPDYE7PQ495Y7 208 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 FOXB2Q5VYV0 432 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 KIAA0895LQ68EN5 471 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 KIAA1161Q6NSJ0 714 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 EFCAB12Q6NXP0 572 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 NEK8Q86SG6 692 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 NME9Q86XW9 330 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 MAPKAPK5Q8IW41 473 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 KRT78Q8N1N4 520 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 TMEM132CQ8N3T6 1108 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 LNX2Q8N448 690 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 CELF2-AS1Q8N7Q2 184 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 OR56A1Q8NGH5 318 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 BOD1Q96IK1 185 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 BHMT2Q9H2M3 363 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 CPNE5Q9HCH3 593 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 CASS4Q9NQ75 786 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 ANLNQ9NQW6 1124 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 KLHL11Q9NVR0 708 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 INPP5FQ9Y2H2 1132 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 COQ6Q9Y2Z9 468 aa1.88□□□□□ -2.11
TMEM56-204ENST00000463375 TRBV23-1A0A0A0MS06 115 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 TBKBP1A7MCY6 615 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 B4E1Z4 1266 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 ADCY3O60266 1144 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 EFCAB14O75071 495 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 NPTXRO95502 500 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 LY86O95711 162 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 LATS1O95835 1130 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 RBM25P49756 843 aaKnown RBP1.87□□□□□ -2.11
TMEM56-204ENST00000463375 HDLBPQ00341 1268 aaKnown RBP1.87□□□□□ -2.11
TMEM56-204ENST00000463375 HYAL1Q12794 435 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 ANKS6Q68DC2 871 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 MEPCEQ7L2J0 689 aaKnown RBP1.87□□□□□ -2.11
TMEM56-204ENST00000463375 THNSL2Q86YJ6 484 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 MSL3Q8N5Y2 521 aaKnown RBP1.87□□□□□ -2.11
TMEM56-204ENST00000463375 RNF169Q8NCN4 708 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 DENND1AQ8TEH3 1009 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 TFAP2CQ92754 450 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 HIST1H2AHQ96KK5 128 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 TUBGCP5Q96RT8 1024 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 HIST1H2AJQ99878 128 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 TGIF2Q9GZN2 237 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 MTFR1LQ9H019 292 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 EBF3Q9H4W6 596 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 GALNT9Q9HCQ5 603 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 NRIP3Q9NQ35 241 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 POGKQ9P215 609 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 DMTF1Q9Y222 760 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 ATP11BQ9Y2G3 1177 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 TNPO3Q9Y5L0 923 aaKnown RBP1.87□□□□□ -2.11
TMEM56-204ENST00000463375 NOX1Q9Y5S8 564 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 WNT6Q9Y6F9 365 aa1.87□□□□□ -2.11
TMEM56-204ENST00000463375 CCDC151A5D8V7 595 aa1.86□□□□□ -2.11
TMEM56-204ENST00000463375 DVL2O14641 736 aa1.86□□□□□ -2.11
TMEM56-204ENST00000463375 PPEF2O14830 753 aa1.86□□□□□ -2.11
TMEM56-204ENST00000463375 ORC4O43929 436 aa1.86□□□□□ -2.11
TMEM56-204ENST00000463375 SEC24DO94855 1032 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms