RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 SCP2P22307 547 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 TXLNAP40222 546 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 SCNN1GP51170 649 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 DLX2Q07687 328 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-203ENST00000463172 STRN3Q13033 797 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 SF3A1Q15459 793 aaKnown RBP14.42□□□□□ -0.1
HDAC1-203ENST00000463172 TMEM184AQ6ZMB5 413 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 SYT2Q8N9I0 419 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-203ENST00000463172 SMRP1Q8NCR6 262 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 MSLNLQ96KJ4 702 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 MMTAG2Q9BU76 263 aaKnown RBP14.42□□□□□ -0.1
HDAC1-203ENST00000463172 MRPL4Q9BYD3 311 aaKnown RBP14.42□□□□□ -0.1
HDAC1-203ENST00000463172 CCDC113Q9H0I3 377 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 ZBP1Q9H171 429 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 ZSCAN16Q9H4T2 348 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-203ENST00000463172 PDZD7Q9H5P4 517 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 TMEM134Q9H6X4 195 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 MRPL17Q9NRX2 175 aaKnown RBP14.42□□□□□ -0.1
HDAC1-203ENST00000463172 BARX2Q9UMQ3 279 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-203ENST00000463172 URODP06132 367 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 PLA2G4BP0C869 781 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 ALADP13716 330 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 SYT1P21579 422 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 AKAP5P24588 427 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 ABCD1P33897 745 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 NPTX2P47972 431 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 YARSP54577 528 aaKnown RBP14.41□□□□□ -0.1
HDAC1-203ENST00000463172 ATF7IP2Q5U623 682 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 KIAA1841Q6NSI8 718 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 CES5AQ6NT32 575 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 LLGL2Q6P1M3 1020 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 C1orf186Q6ZWK4 172 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 CDR2LQ86X02 465 aaPredicted RBP14.41□□□□□ -0.1
HDAC1-203ENST00000463172 COLGALT2Q8IYK4 626 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 SNX21Q969T3 373 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 ZFP42Q96MM3 310 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 RUSC1Q9BVN2 902 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 TOPORSQ9NS56 1045 aaPredicted RBP14.41□□□□□ -0.1
HDAC1-203ENST00000463172 DZANK1Q9NVP4 752 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 CLEC1BQ9P126 229 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 LARSQ9P2J5 1176 aaKnown RBP14.41□□□□□ -0.1
HDAC1-203ENST00000463172 CCDC39Q9UFE4 941 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 DPP7Q9UHL4 492 aa14.41□□□□□ -0.1
HDAC1-203ENST00000463172 PRG3Q9Y2Y8 225 aaPredicted RBP14.41□□□□□ -0.1
HDAC1-203ENST00000463172 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 CLASP2O75122 1294 aaKnown RBP14.4□□□□□ -0.1
HDAC1-203ENST00000463172 GLP2RO95838 553 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 SOD2P04179 222 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 KRT18P05783 430 aaKnown RBP14.4□□□□□ -0.1
HDAC1-203ENST00000463172 THP07101 528 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 PLS3P13797 630 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 CREMQ03060 361 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 DSC1Q08554 894 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 TMEM119Q4V9L6 283 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 ANKRD54Q6NXT1 300 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 SPIRE2Q8WWL2 714 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 PNMA5Q96PV4 448 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 PLIN2Q99541 437 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 TCHPQ9BT92 498 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 KIFC3Q9BVG8 833 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 HERC2P3Q9BVR0 1158 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 CCDC94Q9BW85 323 aaPredicted RBP14.4□□□□□ -0.1
HDAC1-203ENST00000463172 ODF2LQ9ULJ1 636 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 TNFSF13BQ9Y275 285 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
HDAC1-203ENST00000463172 MUC3AQ02505 3323 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 STX6O43752 255 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 GLUD2P49448 558 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 AFF1P51825 1210 aaKnown RBP14.39□□□□□ -0.11
HDAC1-203ENST00000463172 SLC12A3P55017 1021 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 ZP2Q05996 745 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 ITIH3Q06033 890 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 TUSC3Q13454 348 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 ZNF568Q3ZCX4 644 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 KCNK18Q7Z418 384 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 TMEM173Q86WV6 379 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-203ENST00000463172 NECTIN4Q96NY8 510 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 NTPCRQ9BSD7 190 aaKnown RBP14.39□□□□□ -0.11
HDAC1-203ENST00000463172 SNTG2Q9NY99 539 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 KLK14Q9P0G3 267 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 ARHGAP28Q9P2N2 729 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 USP15Q9Y4E8 981 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-203ENST00000463172 HCFC2Q9Y5Z7 792 aa14.39□□□□□ -0.11
HDAC1-203ENST00000463172 CITO14578 2027 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 SLC16A4O15374 487 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 TBCAO75347 108 aaKnown RBP14.38□□□□□ -0.11
HDAC1-203ENST00000463172 TADA2AO75478 443 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 RECQL4O94761 1208 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 ADH1AP07327 375 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 KLRC2P26717 231 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 ELAVL2Q12926 359 aaKnown RBP14.38□□□□□ -0.11
HDAC1-203ENST00000463172 RESTQ13127 1097 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 PTPN14Q15678 1187 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 GPBP1Q86WP2 473 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 BCL7CQ8WUZ0 217 aaPredicted RBP14.38□□□□□ -0.11
HDAC1-203ENST00000463172 PHF7Q9BWX1 381 aaPredicted RBP14.38□□□□□ -0.11
HDAC1-203ENST00000463172 POLD4Q9HCU8 107 aa14.38□□□□□ -0.11
HDAC1-203ENST00000463172 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.38□□□□□ -0.11
HDAC1-203ENST00000463172 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms