RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 TCHPQ9BT92 498 aa12.78□□□□□ -0.36
TRAF3IP1-204ENST00000462122 NXF3Q9H4D5 531 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP1-204ENST00000462122 RSAD1Q9HA92 442 aa12.78□□□□□ -0.36
TRAF3IP1-204ENST00000462122 PTPRHQ9HD43 1115 aa12.78□□□□□ -0.36
TRAF3IP1-204ENST00000462122 EXOC1Q9NV70 894 aa12.78□□□□□ -0.36
TRAF3IP1-204ENST00000462122 TBC1D7Q9P0N9 293 aa12.78□□□□□ -0.36
TRAF3IP1-204ENST00000462122 USP20Q9Y2K6 914 aa12.78□□□□□ -0.36
TRAF3IP1-204ENST00000462122 GIT1Q9Y2X7 761 aa12.78□□□□□ -0.36
TRAF3IP1-204ENST00000462122 EIF3DO15371 548 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 CLDN3O15551 220 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 KLRC4O43908 158 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 RPN1P04843 607 aaKnown RBP12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 TAP1Q03518 808 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 MCL1Q07820 350 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 DPYDQ12882 1025 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 PSMD2Q13200 908 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 NOLC1Q14978 699 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 CLLU1OSQ5K130 101 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 AGMOQ6ZNB7 445 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 LRRC43Q8N309 656 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 URGCPQ8TCY9 931 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 HELQQ8TDG4 1101 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 LPPQ93052 612 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 CASD1Q96PB1 797 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 TGS1Q96RS0 853 aaKnown RBP12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 CDT1Q9H211 546 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 ZNF576Q9H609 170 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 TMEM206Q9H813 350 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 RNF19AQ9NV58 838 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 ANKFY1Q9P2R3 1169 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 UBE4BO95155 1302 aa12.77□□□□□ -0.37
TRAF3IP1-204ENST00000462122 CARNS1A5YM72 827 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 ABLIM1O14639 778 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 INPPL1O15357 1258 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 OFD1O75665 1012 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 MYBP10242 640 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 GRM5P41594 1212 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 GATMP50440 423 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 CASP5P51878 434 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 KCNB1Q14721 858 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 KYAT1Q16773 422 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 PAN2Q504Q3 1202 aaKnown RBP12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 NOMO2Q5JPE7 1267 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 SLFN12LQ6IEE8 588 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 CLP1Q92989 425 aaKnown RBP12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 CCDC94Q9BW85 323 aaPredicted RBP12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 FGFBP2Q9BYJ0 223 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 TOPORSQ9NS56 1045 aaPredicted RBP12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 RMND1Q9NWS8 449 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 KANSL3Q9P2N6 904 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 HES2Q9Y543 173 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 CHD7Q9P2D1 2997 aa12.76□□□□□ -0.37
TRAF3IP1-204ENST00000462122 MEIS3P2A8K0S8 358 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 RHOBTB3O94955 611 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 ARHGEF15O94989 841 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 KIF20AO95235 890 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 SMC2O95347 1197 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 MLH1P40692 756 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 MATR3P43243 847 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 YARSP54577 528 aaKnown RBP12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 ERVK-21P61565 698 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 BMT2Q1RMZ1 405 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 EPM2AIP1Q7L775 607 aaPredicted RBP12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 ZBTB33Q86T24 672 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 SYCP3Q8IZU3 236 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 ZNF507Q8TCN5 953 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 GBF1Q92538 1859 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 HPS3Q969F9 1004 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 RPS6KC1Q96S38 1066 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 APOL6Q9BWW8 343 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 TTYH1Q9H313 450 aaPredicted RBP12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 SLC39A2Q9NP94 309 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 AAASQ9NRG9 546 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 SNTG2Q9NY99 539 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 PARP2Q9UGN5 583 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 INPP5FQ9Y2H2 1132 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 MRPL42Q9Y6G3 142 aaKnown RBP12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 STYXL1Q9Y6J8 313 aa12.75□□□□□ -0.37
TRAF3IP1-204ENST00000462122 A0A0B4J269 797 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 ARL5CA6NH57 179 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 RECQL4O94761 1208 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 PRPF6O94906 941 aaKnown RBP12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 LINC00271P0C7V0 271 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 HARSP12081 509 aaKnown RBP12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 LAG3P18627 525 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 AKAP5P24588 427 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 KCNA1Q09470 495 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 PNOCQ13519 176 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 SLC39A4Q6P5W5 647 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 GLIS3Q8NEA6 775 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 ZBTB45Q96K62 511 aaPredicted RBP12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 GSDMAQ96QA5 445 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 GAD1Q99259 594 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 PLVAPQ9BX97 442 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 GTPBP4Q9BZE4 634 aaKnown RBP12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 GBP3Q9H0R5 595 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 SEMA6BQ9H3T3 888 aa12.74□□□□□ -0.37
TRAF3IP1-204ENST00000462122 LMBRD1Q9NUN5 540 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms