RNA–Protein interactions for RNA: ENST00000461780.1

PPARGC1B-206, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 4

Gene PPARGC1B, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-206ENST00000461780 ZDHHC7Q9NXF8 308 aa16.94■□□□□ 0.3
PPARGC1B-206ENST00000461780 DDX25Q9UHL0 483 aaKnown RBP16.94■□□□□ 0.3
PPARGC1B-206ENST00000461780 SSX2IPQ9Y2D8 614 aa16.94■□□□□ 0.3
PPARGC1B-206ENST00000461780 ITGA4P13612 1032 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 OR1G1P47890 313 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 AKAP17AQ02040 695 aaKnown RBP16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 MBTD1Q05BQ5 628 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 POU5F1BQ06416 359 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 EMC2Q15006 297 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 PPP4R3AQ6IN85 833 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 POTEHQ6S545 545 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 ST13P5Q8NFI4 369 aaPredicted RBP16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 PJA1Q8NG27 643 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 STAMQ92783 540 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 FGF14Q92915 247 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 CEP170P1Q96L14 293 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 FAM193BQ96PV7 902 aaPredicted RBP16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 CSRNP2Q9H175 543 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 ARHGEF3Q9NR81 526 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.93■□□□□ 0.38e-6■■□□□ 11.6
PPARGC1B-206ENST00000461780 RGL1Q9NZL6 768 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 NUMBLQ9Y6R0 609 aa16.93■□□□□ 0.3
PPARGC1B-206ENST00000461780 F5P12259 2224 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 SHISA7A6NL88 538 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 ASAP2O43150 1006 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 GAS2O43903 313 aaKnown RBP16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 ZMYND10O75800 440 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 ARF4P18085 180 aaPredicted RBP16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 RPL17P18621 184 aaKnown RBP16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 AXLP30530 894 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 FGD1P98174 961 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 NONOQ15233 471 aaKnown RBP eCLIP16.92■□□□□ 0.32e-7■■■□□ 16.5
PPARGC1B-206ENST00000461780 EPHA7Q15375 998 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 EARS2Q5JPH6 523 aaKnown RBP16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 FUT10Q6P4F1 479 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 PALB2Q86YC2 1186 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 C1orf210Q8IVY1 113 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 KIAA2013Q8IYS2 634 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 FAM177A1Q8N128 213 aaPredicted RBP16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 DCLK2Q8N568 766 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 CPB2Q96IY4 423 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 FAM20AQ96MK3 541 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 PAAF1Q9BRP4 392 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 LXNQ9BS40 222 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 PHF20Q9BVI0 1012 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 FOXQ1Q9C009 403 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 NXF3Q9H4D5 531 aaKnown RBP16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 BMP2KQ9NSY1 1161 aaPredicted RBP16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 CACNG4Q9UBN1 327 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 SIT1Q9Y3P8 196 aa16.92■□□□□ 0.3
PPARGC1B-206ENST00000461780 ZMYM2Q9UBW7 1377 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 YWHABP31946 246 aaKnown RBP16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 GPC5P78333 572 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 CAPSQ13938 189 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 PCBP1Q15365 356 aaKnown RBP eCLIP16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 NAB2Q15742 525 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 RTP2Q5QGT7 225 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 GALNT17Q6IS24 598 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 PARM1Q6UWI2 310 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 ASAP3Q8TDY4 903 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 NELL1Q92832 810 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 CCDC51Q96ER9 411 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 CLSTN3Q9BQT9 956 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 CXCL16Q9H2A7 254 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 ZSWIM6Q9HCJ5 1215 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 DPP7Q9UHL4 492 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 FBXW11Q9UKB1 542 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 GIT1Q9Y2X7 761 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 CHD8Q9HCK8 2581 aa16.91■□□□□ 0.3
PPARGC1B-206ENST00000461780 MAP1BP46821 2468 aaKnown RBP16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 SPDYE4A6NLX3 237 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 TBX3O15119 743 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 B4GALT5O43286 388 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 SLITRK3O94933 977 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 DEXIO95424 95 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 ARL2P36404 184 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 NTHL1P78549 312 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 SSRP1Q08945 709 aaKnown RBP16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 USP41Q3LFD5 358 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 SPECC1Q5M775 1068 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 NOTUMQ6P988 496 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 DCLRE1AQ6PJP8 1040 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 EXOC8Q8IYI6 725 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 RABGGTAQ92696 567 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 DYDC2Q96IM9 177 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 HSD17B14Q9BPX1 270 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 NFKBIZQ9BYH8 718 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 GJB4Q9NTQ9 266 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 ADAM28Q9UKQ2 775 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 KCNJ14Q9UNX9 436 aa16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 MTF2Q9Y483 593 aaPredicted RBP16.9■□□□□ 0.3
PPARGC1B-206ENST00000461780 A0A1B0GUA9 196 aa16.89■□□□□ 0.29
PPARGC1B-206ENST00000461780 ADAM12O43184 909 aa16.89■□□□□ 0.29
PPARGC1B-206ENST00000461780 LYPLA2O95372 231 aa16.89■□□□□ 0.29
PPARGC1B-206ENST00000461780 AKAP5P24588 427 aa16.89■□□□□ 0.29
PPARGC1B-206ENST00000461780 CTTNQ14247 550 aaKnown RBP16.89■□□□□ 0.29
PPARGC1B-206ENST00000461780 PRSS55Q6UWB4 352 aaPredicted RBP16.89■□□□□ 0.29
PPARGC1B-206ENST00000461780 RUFY3Q7L099 469 aa16.89■□□□□ 0.29
PPARGC1B-206ENST00000461780 GET4Q7L5D6 327 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms