RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TLR9Q9NR96 1032 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.95□□□□□ -1.78
VCL-203ENST00000461383 PUF60Q9UHX1 559 aaKnown RBP3.95□□□□□ -1.78
VCL-203ENST00000461383 POLHQ9Y253 713 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 PTPN22Q9Y2R2 807 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 VWA7Q9Y334 891 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 DAAM1Q9Y4D1 1078 aa3.95□□□□□ -1.78
VCL-203ENST00000461383 A0A1W2PR48 441 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 NPIPB6E9PJ23 425 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 H3BUI4 141 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 ETV2O00321 342 aaPredicted RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 DDX3XO00571 662 aaKnown RBP eCLIP3.94□□□□□ -1.78
VCL-203ENST00000461383 PRRG2O14669 202 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 SGTAO43765 313 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 ALDH1A2O94788 518 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 ARIH2O95376 493 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 HRGP04196 525 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 GAAP10253 952 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 SYN1P17600 705 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 PEX2P28328 305 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 SMARCA1P28370 1054 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 ETV4P43268 484 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 MRE11P49959 708 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 MAP2K6P52564 334 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 AK2P54819 239 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 CDC42EP1Q00587 391 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 IFIT5Q13325 482 aaKnown RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 TOP3AQ13472 1001 aaPredicted RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 EIF4HQ15056 248 aaKnown RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 UBE3CQ15386 1083 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 CNN3Q15417 329 aaKnown RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 VPS72Q15906 364 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 ZNF568Q3ZCX4 644 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 CNKSR3Q6P9H4 555 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 ATG14Q6ZNE5 492 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 TAS1R1Q7RTX1 841 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 MORC1Q86VD1 984 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 SH2D3CQ8N5H7 860 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 PIK3C3Q8NEB9 887 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 OR2I1PQ8NGU4 316 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 PPP1R14CQ8TAE6 165 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 ZCCHC14Q8WYQ9 949 aaKnown RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 STRBPQ96SI9 672 aaKnown RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 MYD88Q99836 296 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 APOL5Q9BWW9 433 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 CARD11Q9BXL7 1154 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 TMEM168Q9H0V1 697 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 BARX1Q9HBU1 254 aaPredicted RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 EPB41L4AQ9HCS5 686 aaPredicted RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 CNNM1Q9NRU3 951 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 LMBRD1Q9NUN5 540 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 TMEM140Q9NV12 185 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 NTMQ9P121 344 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 FEZ2Q9UHY8 353 aaPredicted RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 PHTF1Q9UMS5 762 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 PCDHB1Q9Y5F3 818 aa3.94□□□□□ -1.78
VCL-203ENST00000461383 RBM8AQ9Y5S9 174 aaKnown RBP3.94□□□□□ -1.78
VCL-203ENST00000461383 TCAF2A6NFQ2 919 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 RFXAPO00287 272 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 RPL13P26373 211 aaKnown RBP3.93□□□□□ -1.78
VCL-203ENST00000461383 PTPN7P35236 360 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 WNT3AP56704 352 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 LINC00310P59036 64 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 GPSM2P81274 684 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 DUSP2Q05923 314 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 NOGQ13253 232 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 FGL2Q14314 439 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 SEPT2Q15019 361 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 PCOLCEQ15113 449 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 ATP2B3Q16720 1220 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 MST1LQ2TV78 715 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 KHDC1Q4VXA5 237 aaKnown RBP3.93□□□□□ -1.78
VCL-203ENST00000461383 C19orf54Q5BKX5 351 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 ZMAT1Q5H9K5 638 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 C10orf62Q5T681 223 aaPredicted RBP3.93□□□□□ -1.78
VCL-203ENST00000461383 CIAPIN1Q6FI81 312 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 MAEAQ7L5Y9 396 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 HEATR3Q7Z4Q2 680 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 SRLQ86TD4 932 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 REXO1L1PQ8IX06 675 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 FAM186BQ8IYM0 893 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 KIAA0319LQ8IZA0 1049 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 BCL6BQ8N143 479 aaPredicted RBP3.93□□□□□ -1.78
VCL-203ENST00000461383 MSL3Q8N5Y2 521 aaKnown RBP3.93□□□□□ -1.78
VCL-203ENST00000461383 PLA2G15Q8NCC3 412 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 NUDT10Q8NFP7 164 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 NSUN6Q8TEA1 469 aaKnown RBP3.93□□□□□ -1.78
VCL-203ENST00000461383 FNIP1Q8TF40 1166 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 LRTOMTQ8WZ04 291 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 LPPQ93052 612 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 NKD2Q969F2 451 aaPredicted RBP3.93□□□□□ -1.78
VCL-203ENST00000461383 CYFIP2Q96F07 1278 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 NUDT11Q96G61 164 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 SLC35A4Q96G79 324 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 PWWP2AQ96N64 755 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 VRK1Q99986 396 aaPredicted RBP3.93□□□□□ -1.78
VCL-203ENST00000461383 ARPC5LQ9BPX5 153 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 LRFN3Q9BTN0 628 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 NUP62CLQ9H1M0 184 aa3.93□□□□□ -1.78
VCL-203ENST00000461383 BHMT2Q9H2M3 363 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms