RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 QPCTQ16769 361 aa15.42■□□□□ 0.06
NCL-207ENST00000461347 C2CD6Q53TS8 623 aa15.42■□□□□ 0.06
NCL-207ENST00000461347 IRF2BP2Q7Z5L9 587 aa15.42■□□□□ 0.06
NCL-207ENST00000461347 SCFD2Q8WU76 684 aa15.42■□□□□ 0.06
NCL-207ENST00000461347 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.41■□□□□ 0.06
NCL-207ENST00000461347 ZBED4O75132 1171 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 CPP00450 1065 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 DNAJC24Q6P3W2 148 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 COL23A1Q86Y22 540 aaPredicted RBP15.41■□□□□ 0.06
NCL-207ENST00000461347 C4orf33Q8N1A6 199 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 LRRC15Q8TF66 581 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 PYROXD1Q8WU10 500 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 TXNDC9O14530 226 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 EIF3DO15371 548 aaKnown RBP eCLIP15.41■□□□□ 0.061e-7■□□□□ 8.1
NCL-207ENST00000461347 LCA5LO95447 670 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 ITGA8P53708 1063 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 POLGP54098 1239 aaPredicted RBP15.41■□□□□ 0.06
NCL-207ENST00000461347 NPEPPSP55786 919 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 MTM1Q13496 603 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 MCF2L2Q86YR7 1114 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 FBXL13Q8NEE6 735 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 MORC4Q8TE76 937 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 TATDN2Q93075 761 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 ERP27Q96DN0 273 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 PRR12Q9ULL5 1215 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 L3MBTL1Q9Y468 752 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 CES2O00748 559 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 OPLAHO14841 1288 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 P4HBP07237 508 aaKnown RBP15.41■□□□□ 0.06
NCL-207ENST00000461347 RAD23BP54727 409 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 GPS1Q13098 491 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 CASC4Q6P4E1 433 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 TMEM270Q6UE05 265 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 CENPUQ71F23 418 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 YTHDF3Q7Z739 585 aaKnown RBP15.41■□□□□ 0.06
NCL-207ENST00000461347 CCDC110Q8TBZ0 833 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 CPA5Q8WXQ8 436 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 KRT35Q92764 455 aa15.41■□□□□ 0.06
NCL-207ENST00000461347 ARHGAP42A6NI28 874 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 ZBTB39O15060 712 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 STAM2O75886 525 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 DCTN3O75935 186 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 SGPL1O95470 568 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 RARGP13631 454 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 RPL21P46778 160 aaKnown RBP15.4■□□□□ 0.06
NCL-207ENST00000461347 QARSP47897 775 aaKnown RBP15.4■□□□□ 0.06
NCL-207ENST00000461347 COBLL1Q53SF7 1204 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 ATL2Q8NHH9 583 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 ATP8B4Q8TF62 1192 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 RBM15Q96T37 977 aaKnown RBP eCLIP15.4■□□□□ 0.063e-10■□□□□ 10.8
NCL-207ENST00000461347 NEUROG2Q9H2A3 272 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 CDC42EP4Q9H3Q1 356 aaKnown RBP15.4■□□□□ 0.06
NCL-207ENST00000461347 GINM1Q9NU53 330 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 NYAP2Q9P242 653 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 DCDC2CA8MYV0 355 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 MT-ND3P03897 115 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 HMGB2P26583 209 aaKnown RBP15.4■□□□□ 0.06
NCL-207ENST00000461347 CAV1Q03135 178 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 HADHQ16836 314 aaKnown RBP15.4■□□□□ 0.06
NCL-207ENST00000461347 BSPRYQ5W0U4 402 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 ZBED8Q8IZ13 594 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 IKZF4Q9H2S9 585 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 TAS2R14Q9NYV8 317 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 POLLQ9UGP5 575 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 C5P01031 1676 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 SLC12A3P55017 1021 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 BIRC2Q13490 618 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 MTERF2Q49AM1 385 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 LGSNQ5TDP6 509 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 SUPT20HQ8NEM7 779 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 NUDCD1Q96RS6 583 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 TMEM117Q9H0C3 514 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 KDM4CQ9H3R0 1056 aa15.4■□□□□ 0.06
NCL-207ENST00000461347 ALG13Q9NP73 1137 aaKnown RBP15.4■□□□□ 0.06
NCL-207ENST00000461347 FAM86B1E9PN63 330 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 FAM86B2P0C5J1 330 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 ITIH2P19823 946 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 MTMR1Q13613 665 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 SLC35G1Q2M3R5 365 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 CAPRIN2Q6IMN6 1127 aaKnown RBP15.39■□□□□ 0.05
NCL-207ENST00000461347 PHLDB3Q6NSJ2 640 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 TTC17Q96AE7 1141 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 GBP5Q96PP8 586 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 CBWD1Q9BRT8 395 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 TRAIPQ9BWF2 469 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 KCTD10Q9H3F6 313 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 UVRAGQ9P2Y5 699 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 RBAK-RBAKDNI3L0D1 243 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 TLR3O15455 904 aaKnown RBP15.39■□□□□ 0.05
NCL-207ENST00000461347 PRKCIP41743 596 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 ERFP50548 548 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 DNAJC3Q13217 504 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 CFAP157Q5JU67 520 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 SCYL2Q6P3W7 929 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 STAMBPL1Q96FJ0 436 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 FAM81BQ96LP2 452 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 POLR3CQ9BUI4 534 aaPredicted RBP15.39■□□□□ 0.05
NCL-207ENST00000461347 CALN1Q9BXU9 219 aa15.39■□□□□ 0.05
NCL-207ENST00000461347 DDX4Q9NQI0 724 aaKnown RBP15.39■□□□□ 0.05
NCL-207ENST00000461347 ANP32DO95626 131 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms