RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 KLRC3Q07444 240 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 SCRN1Q12765 414 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 CYP27C1Q4G0S4 372 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 FGD2Q7Z6J4 655 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 MB21D2Q8IYB1 491 aaPredicted RBP9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 COPS5Q92905 334 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 NUP88Q99567 741 aaPredicted RBP9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 ARHGAP39Q9C0H5 1083 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 DUSP15Q9H1R2 295 aaPredicted RBP9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 RNF41Q9H4P4 317 aaPredicted RBP9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 TOMM22Q9NS69 142 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 TMOD4Q9NZQ9 345 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 RBPJLQ9UBG7 517 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 STOML1Q9UBI4 398 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 MAPRE3Q9UPY8 281 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 CASP8AP2Q9UKL3 1982 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 BRCA2P51587 3418 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 RNF225M0QZC1 329 aaPredicted RBP9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 EFCAB14O75071 495 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 F13BP05160 661 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 CNGA1P29973 690 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 ECI1P42126 302 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 HERVK_113P62684 666 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 POU4F1Q01851 419 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 SEC23AQ15436 765 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 ADCK5Q3MIX3 580 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 PRR23CQ6ZRP0 262 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 CHST3Q7LGC8 479 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 MAMDC2Q7Z304 686 aaPredicted RBP9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 JAMLQ86YT9 394 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 ZNF655Q8N720 491 aaPredicted RBP9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 ENAHQ8N8S7 591 aaPredicted RBP9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 GMCL1P1Q8NEA9 526 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 ANKS1AQ92625 1134 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 LPAR1Q92633 364 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 ESR2Q92731 530 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 TP53INP1Q96A56 240 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 CHMP4CQ96CF2 233 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 SCLYQ96I15 445 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 MFSD14AQ96MC6 490 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 PARK7Q99497 189 aaKnown RBP9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 TMEM47Q9BQJ4 181 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 FBXO28Q9NVF7 368 aa9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 DDX56Q9NY93 547 aaKnown RBP9.34□□□□□ -0.91
ECHDC1-212ENST00000461239 ZSWIM8A7E2V4 1837 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 STXBP3O00186 592 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 AURKAO14965 403 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 WDR46O15213 610 aaKnown RBP9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 FKTNO75072 461 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 CD3EP07766 207 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 HSPA4P34932 840 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 SOX5P35711 763 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 SP3Q02447 781 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 FAM83BQ5T0W9 1011 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 RNF43Q68DV7 783 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 CASC1Q6TDU7 716 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 LBX2Q6XYB7 198 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 DGKHQ86XP1 1220 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 FBXL6Q8N531 539 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 ANKRD13CQ8N6S4 541 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 UBR7Q8N806 425 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 NPLOC4Q8TAT6 608 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 CD99L2Q8TCZ2 262 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 IGDCC4Q8TDY8 1250 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 KRT23Q9C075 422 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 BTBD7Q9P203 1132 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 SYNPO2Q9UMS6 1093 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 ADAMTS5Q9UNA0 930 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 STX8Q9UNK0 236 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 ATP8A1Q9Y2Q0 1164 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 ST14Q9Y5Y6 855 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 MYH4Q9Y623 1939 aa9.33□□□□□ -0.92
ECHDC1-212ENST00000461239 TNKSO95271 1327 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 THBDP07204 575 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 SNHG28P0DPA3 235 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 TOP1P11387 765 aaKnown RBP9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 IFNGR1P15260 489 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 MCCP23508 829 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 BMP8BP34820 402 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 GATA4P43694 442 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 CDKN1CP49918 316 aaPredicted RBP9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 OXCT1P55809 520 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 IRX3P78415 501 aaPredicted RBP9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 LACTBP83111 547 aaPredicted RBP9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 CYP27A1Q02318 531 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 NKPD1Q17RQ9 610 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 CLEC16AQ2KHT3 1053 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 SLFN13Q68D06 897 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 CWF19L1Q69YN2 538 aaKnown RBP9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 CNNM4Q6P4Q7 775 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 USP53Q70EK8 1073 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 REPS2Q8NFH8 660 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 NCOA7Q8NI08 942 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 DDX1Q92499 740 aaKnown RBP9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 TCTN2Q96GX1 697 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 TTC14Q96N46 770 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 FCRL3Q96P31 734 aaPredicted RBP9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 SH2D4AQ9H788 454 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 MORF4L1Q9UBU8 362 aa9.32□□□□□ -0.92
ECHDC1-212ENST00000461239 TRAF6Q9Y4K3 522 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms