RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 KRT13P13646 458 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 CST5P28325 142 aaPredicted RBP18.32■□□□□ 0.52
NELFCD-201ENST00000460601 KRT9P35527 623 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 TMEM132AQ24JP5 1023 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 ATF7IP2Q5U623 682 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 LMBRD2Q68DH5 695 aaPredicted RBP18.32■□□□□ 0.52
NELFCD-201ENST00000460601 ZPBP2Q6X784 338 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 LSM14BQ9BX40 385 aaKnown RBP18.32■□□□□ 0.52
NELFCD-201ENST00000460601 ABHD10Q9NUJ1 306 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 GCNT4Q9P109 453 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 LRRIQ3A6PVS8 624 aaPredicted RBP18.32■□□□□ 0.52
NELFCD-201ENST00000460601 EXTL3O43909 919 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 SCP2P22307 547 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 OSTNP61366 133 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 CYP24A1Q07973 514 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 DNAJC5GQ8N7S2 189 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 PARD3BQ8TEW8 1205 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 PTPRHQ9HD43 1115 aa18.32■□□□□ 0.52
NELFCD-201ENST00000460601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.32■□□□□ 0.523e-6■■■■■ 32.8
NELFCD-201ENST00000460601 ARF4P18085 180 aaPredicted RBP18.31■□□□□ 0.52
NELFCD-201ENST00000460601 PON1P27169 355 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 POU5F1BQ06416 359 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 MTFR1Q15390 333 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 EXOC3L4Q17RC7 722 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 TSHZ1Q6ZSZ6 1077 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 RNF180Q86T96 592 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 IFNLR1Q8IU57 520 aaPredicted RBP18.31■□□□□ 0.52
NELFCD-201ENST00000460601 VTI1AQ96AJ9 217 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 ELMO3Q96BJ8 720 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 TMX1Q9H3N1 280 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 PTPN22Q9Y2R2 807 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 PROZP22891 400 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 ACLYP53396 1101 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 PPP2R3AQ06190 1150 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 ZNF568Q3ZCX4 644 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 SLFN12LQ6IEE8 588 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 DPY19L2P1Q6NXN4 242 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 GJB7Q6PEY0 223 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 CNGA4Q8IV77 575 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 TMEM192Q8IY95 271 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 MFSD14AQ96MC6 490 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 PDE11AQ9HCR9 933 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 NLRC4Q9NPP4 1024 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 PRMT7Q9NVM4 692 aaPredicted RBP18.31■□□□□ 0.52
NELFCD-201ENST00000460601 CAPN11Q9UMQ6 739 aa18.31■□□□□ 0.52
NELFCD-201ENST00000460601 PTPRJQ12913 1337 aa18.3■□□□□ 0.52
NELFCD-201ENST00000460601 ZNF233A6NK53 670 aa18.3■□□□□ 0.52
NELFCD-201ENST00000460601 MAPK13O15264 365 aa18.3■□□□□ 0.52
NELFCD-201ENST00000460601 TSPAN1O60635 241 aa18.3■□□□□ 0.52
NELFCD-201ENST00000460601 PRMT2P55345 433 aa18.3■□□□□ 0.52
NELFCD-201ENST00000460601 NOLC1Q14978 699 aaKnown RBP eCLIP18.3■□□□□ 0.52
NELFCD-201ENST00000460601 E4F1Q66K89 784 aaPredicted RBP18.3■□□□□ 0.52
NELFCD-201ENST00000460601 ZNF410Q86VK4 478 aa18.3■□□□□ 0.52
NELFCD-201ENST00000460601 THNSL1Q8IYQ7 743 aa18.3■□□□□ 0.52
NELFCD-201ENST00000460601 PCSK9Q8NBP7 692 aaKnown RBP18.3■□□□□ 0.52
NELFCD-201ENST00000460601 LUC7L2Q9Y383 392 aaKnown RBP18.3■□□□□ 0.52
NELFCD-201ENST00000460601 CNTNAP2Q9UHC6 1331 aa18.3■□□□□ 0.52
NELFCD-201ENST00000460601 GNAT1P11488 350 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 POLR2FP61218 127 aaKnown RBP18.29■□□□□ 0.52
NELFCD-201ENST00000460601 MYL7Q01449 175 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 MCL1Q07820 350 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 TRIM14Q14142 442 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 MTF1Q14872 753 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 MPZL3Q6UWV2 235 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 NEK11Q8NG66 645 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 BAG1Q99933 345 aaPredicted RBP18.29■□□□□ 0.52
NELFCD-201ENST00000460601 TMEM117Q9H0C3 514 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.52
NELFCD-201ENST00000460601 CDT1Q9H211 546 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 PDZD7Q9H5P4 517 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 RBAKQ9NYW8 714 aaPredicted RBP18.29■□□□□ 0.52
NELFCD-201ENST00000460601 AJAP1Q9UKB5 411 aaPredicted RBP18.29■□□□□ 0.52
NELFCD-201ENST00000460601 FRMPD3Q5JV73 1810 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 SOWAHDA6NJG2 315 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 ERLIN2O94905 339 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 TPM1P09493 284 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 CTSHP09668 335 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 MSNP26038 577 aaKnown RBP18.29■□□□□ 0.52
NELFCD-201ENST00000460601 FAM187BQ17R55 369 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 TRIM65Q6PJ69 517 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 SIX2Q9NPC8 291 aa18.29■□□□□ 0.52
NELFCD-201ENST00000460601 TRMT13Q9NUP7 481 aaKnown RBP18.29■□□□□ 0.52
NELFCD-201ENST00000460601 ITGA7Q13683 1181 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 SLC9C1Q4G0N8 1177 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 SCARA3Q6AZY7 606 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 GBP6Q6ZN66 633 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 KIAA1524Q8TCG1 905 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 PANX2Q96RD6 677 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 NUP58Q9BVL2 599 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 GANQ9H2C0 597 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 TNFSF13BQ9Y275 285 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 LRRC53A6NM62 1247 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 DARSP14868 501 aaKnown RBP18.28■□□□□ 0.52
NELFCD-201ENST00000460601 SNX17Q15036 470 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 FIGNQ5HY92 759 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 WDR59Q6PJI9 974 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 BAP1Q92560 729 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 ZNF516Q92618 1163 aa18.28■□□□□ 0.52
NELFCD-201ENST00000460601 FAM212AQ96EL1 285 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms