RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 CYP27A1Q02318 531 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 GCNT1Q02742 428 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 PTK2Q05397 1052 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 GFPT1Q06210 699 aaPredicted RBP8.73□□□□□ -1.01
SFPQ-202ENST00000460428 MCL1Q07820 350 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 SREBF2Q12772 1141 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 DRAP1Q14919 205 aaPredicted RBP8.73□□□□□ -1.01
SFPQ-202ENST00000460428 TCEAL1Q15170 157 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 SURF1Q15526 300 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 TAF1CQ15572 869 aaPredicted RBP8.73□□□□□ -1.01
SFPQ-202ENST00000460428 MAPK6Q16659 721 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 ZACNQ401N2 412 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 ZNF569Q5MCW4 686 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 TSHZ1Q6ZSZ6 1077 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 SV2AQ7L0J3 742 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 ENOSF1Q7L5Y1 443 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 KIAA1328Q86T90 577 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 TRIM50Q86XT4 487 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 ZBTB8OSQ8IWT0 167 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 FBXL13Q8NEE6 735 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 TRIM58Q8NG06 486 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 AFG1LQ8WV93 481 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 UBE2Q2Q8WVN8 375 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 SOCS4Q8WXH5 440 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 NAPGQ99747 312 aaPredicted RBP8.73□□□□□ -1.01
SFPQ-202ENST00000460428 ACO2Q99798 780 aaKnown RBP8.73□□□□□ -1.01
SFPQ-202ENST00000460428 TARS2Q9BW92 718 aaKnown RBP8.73□□□□□ -1.01
SFPQ-202ENST00000460428 DEF6Q9H4E7 631 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 RAB20Q9NX57 234 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 SUCLA2Q9P2R7 463 aaPredicted RBP8.73□□□□□ -1.01
SFPQ-202ENST00000460428 CPA4Q9UI42 421 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 NAGPAQ9UK23 515 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 ZNF215Q9UL58 517 aaPredicted RBP8.73□□□□□ -1.01
SFPQ-202ENST00000460428 CNTNAP2Q9UHC6 1331 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 ZSWIM8A7E2V4 1837 aa8.73□□□□□ -1.01
SFPQ-202ENST00000460428 A0A0A6YYK5 440 aaPredicted RBP8.72□□□□□ -1.01
SFPQ-202ENST00000460428 GOLGA8IPA6NC78 632 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 RRN3P2A6NIE6 340 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 GOLGA8JA6NMD2 632 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 H3BRB1 525 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 CA12O43570 354 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 URI1O94763 535 aaPredicted RBP8.72□□□□□ -1.01
SFPQ-202ENST00000460428 RGS2P41220 211 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 NLRP11P59045 1033 aaKnown RBP8.72□□□□□ -1.01
SFPQ-202ENST00000460428 TNFAIP2Q03169 654 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 MBTD1Q05BQ5 628 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 PRPF4BQ13523 1007 aaKnown RBP8.72□□□□□ -1.01
SFPQ-202ENST00000460428 DGKDQ16760 1214 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 TDRD12Q587J7 1177 aaKnown RBP8.72□□□□□ -1.01
SFPQ-202ENST00000460428 EFCAB12Q6NXP0 572 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 GJB7Q6PEY0 223 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 TRAPPC11Q7Z392 1133 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 VPS36Q86VN1 386 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 BRSK2Q8IWQ3 736 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 REM2Q8IYK8 340 aaPredicted RBP8.72□□□□□ -1.01
SFPQ-202ENST00000460428 FAM71AQ8IYT1 594 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 RNF149Q8NC42 400 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 HELQQ8TDG4 1101 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 ANKRD7Q92527 254 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 SHC3Q92529 594 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 DHX38Q92620 1227 aaKnown RBP8.72□□□□□ -1.01
SFPQ-202ENST00000460428 SECISBP2LQ93073 1101 aaKnown RBP8.72□□□□□ -1.01
SFPQ-202ENST00000460428 SAAL1Q96ER3 474 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 BICD1Q96G01 975 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 FAXDC2Q96IV6 333 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 CALR3Q96L12 384 aaKnown RBP8.72□□□□□ -1.01
SFPQ-202ENST00000460428 TUT1Q9H6E5 874 aaKnown RBP8.72□□□□□ -1.01
SFPQ-202ENST00000460428 IFT122Q9HBG6 1241 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 ADAMTS1Q9UHI8 967 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 GUCA1BQ9UMX6 200 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 TRPC6Q9Y210 931 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 TNFSF13BQ9Y275 285 aa8.72□□□□□ -1.01
SFPQ-202ENST00000460428 EFCAB8A8MWE9 144 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 HAS3O00219 553 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 FOXN3O00409 490 aaPredicted RBP8.71□□□□□ -1.02
SFPQ-202ENST00000460428 DDX3XO00571 662 aaKnown RBP eCLIP8.71□□□□□ -1.02
SFPQ-202ENST00000460428 OGTO15294 1046 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 CLDN3O15551 220 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 ADCY6O43306 1168 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 TACC1O75410 805 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 ALDH1A1P00352 501 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 F2P00734 622 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 PRKCBP05771 671 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 GZMAP12544 262 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 KLRC1P26715 233 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 MARK3P27448 753 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 TMOD1P28289 359 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 PCBP1Q15365 356 aaKnown RBP eCLIP8.71□□□□□ -1.02
SFPQ-202ENST00000460428 WHAMMP3Q1A5X7 153 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 MARCH8Q5T0T0 291 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 GJC2Q5T442 439 aaPredicted RBP8.71□□□□□ -1.02
SFPQ-202ENST00000460428 ALKBH5Q6P6C2 394 aaKnown RBP8.71□□□□□ -1.02
SFPQ-202ENST00000460428 MTHFD1LQ6UB35 978 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 RSRC2Q7L4I2 434 aaKnown RBP8.71□□□□□ -1.02
SFPQ-202ENST00000460428 ZNF410Q86VK4 478 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 WDR49Q8IV35 697 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 ARHGEF19Q8IW93 802 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 ZNF710Q8N1W2 664 aa8.71□□□□□ -1.02
SFPQ-202ENST00000460428 CEP112Q8N8E3 955 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms