RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 PITPNM2Q9BZ72 1349 aa6.61□□□□□ -1.35
VPS13D-202ENST00000460333 CYP3A7-CYP3A51PA0A087WV96 503 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 TESPA1A2RU30 521 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 H0YCG3 227 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 M0QZ92 97 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 IPO5O00410 1097 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 NOP56O00567 594 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 MGEA5O60502 916 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ANP32DO95626 131 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ATP6V1G2O95670 118 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ESRRBO95718 433 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 PAX7P23759 505 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 CYP3A7P24462 503 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 RPA1P27694 616 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ZNF157P51786 506 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 JAK3P52333 1124 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 HUNKP57058 714 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 DHX34Q14147 1143 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 TMED2Q15363 201 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 EPHA7Q15375 998 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 NAALADL2Q58DX5 795 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 KRT80Q6KB66 452 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 PPP1R2P3Q6NXS1 205 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 SAMD7Q7Z3H4 446 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 GPC2Q8N158 579 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 UHMK1Q8TAS1 419 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ZKSCAN4Q969J2 545 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 MRRFQ96E11 262 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 RNPC3Q96LT9 517 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 LRGUKQ96M69 825 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.6□□□□□ -1.352e-6■■□□□ 13.8
VPS13D-202ENST00000460333 LRRC1Q9BTT6 524 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 POLR3CQ9BUI4 534 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 FHDC1Q9C0D6 1143 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 AZI2Q9H6S1 392 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 EMILIN3Q9NT22 766 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 PKD2L1Q9P0L9 805 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 CEP72Q9P209 647 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 SEL1LQ9UBV2 794 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ANAPC5Q9UJX4 755 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 SYNGAP1Q96PV0 1343 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 H0Y3Z8 333 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 M0R2N6 131 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 DDX39AO00148 427 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 EYA4O95677 639 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 GGPS1O95749 300 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 CYP3A4P08684 503 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 GNAT1P11488 350 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 NQO1P15559 274 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 COPB2P35606 906 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ZNF280AP59817 542 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 CYP4A11Q02928 519 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 MTMR2Q13614 643 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 COG2Q14746 738 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 PTPN21Q16825 1174 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 NELFCDQ8IXH7 590 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ATP6V0A1Q93050 837 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 CAVIN3Q969G5 261 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 TRIM11Q96F44 468 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ZIM3Q96PE6 472 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 GMLQ99445 158 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 RIT2Q99578 217 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 RANBP17Q9H2T7 1088 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 RAVER2Q9HCJ3 691 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 KCND2Q9NZV8 630 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 TBC1D7Q9P0N9 293 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ADD3Q9UEY8 706 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 BACH1O14867 736 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 PALMO75781 387 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 PRPF6O94906 941 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 SFNP31947 248 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 CYP27A1Q02318 531 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 COASYQ13057 564 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 EXOC3L4Q17RC7 722 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 CRELD2Q6UXH1 353 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 FAM178BQ8IXR5 827 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 SPDYE1Q8NFV5 336 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 B4GALNT2Q8NHY0 566 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 GABPB2Q8TAK5 448 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 GDAP1Q8TB36 358 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 MORC4Q8TE76 937 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 HIC2Q96JB3 615 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 TTC25Q96NG3 672 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 TGS1Q96RS0 853 aaKnown RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 FAM129AQ9BZQ8 928 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 NDST4Q9H3R1 872 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 DNAJC18Q9H819 358 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 RAB20Q9NX57 234 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 RGS17Q9UGC6 210 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-202ENST00000460333 POTEB3A0JP26 581 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 POTECB2RU33 542 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 O00370 1275 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 PRLRP16471 622 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ANXA13P27216 316 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 COPS2P61201 443 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 KRT76Q01546 638 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 GRB10Q13322 594 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 ADAM9Q13443 819 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 FAM47CQ5HY64 1035 aa6.6□□□□□ -1.35
VPS13D-202ENST00000460333 C16orf87Q6PH81 154 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms