RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 ADSSP30520 456 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 FAM189BP81408 668 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 MCL1Q07820 350 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 IKBKEQ14164 716 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 ZNF568Q3ZCX4 644 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 ZCWPW2Q504Y3 356 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 TWF2Q6IBS0 349 aaKnown RBP11.21□□□□□ -0.61
GARNL3-211ENST00000460176 SASS6Q6UVJ0 657 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.21□□□□□ -0.61
GARNL3-211ENST00000460176 OTOP2Q7RTS6 562 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 ZBTB33Q86T24 672 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 MLKLQ8NB16 471 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 GDF15Q99988 308 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 FUCA2Q9BTY2 467 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 GBP3Q9H0R5 595 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 SEMA6BQ9H3T3 888 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 AGPAT3Q9NRZ7 376 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 C1orf112Q9NSG2 853 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 FAM105AQ9NUU6 356 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 TYW1Q9NV66 732 aaKnown RBP11.21□□□□□ -0.61
GARNL3-211ENST00000460176 ANKFY1Q9P2R3 1169 aa11.21□□□□□ -0.61
GARNL3-211ENST00000460176 TNRC18O15417 2968 aaPredicted RBP11.21□□□□□ -0.62
GARNL3-211ENST00000460176 PDCD11Q14690 1871 aaKnown RBP11.21□□□□□ -0.62
GARNL3-211ENST00000460176 TTC3P53804 2025 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 A0A0B4J269 797 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 A0A0U1RQF3 1178 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 SYCE3A1L190 88 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 PDXKO00764 312 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 CLDN3O15551 220 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 FAM189A1O60320 539 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 ZNF623O75123 536 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 LETM1O95202 739 aaPredicted RBP11.2□□□□□ -0.62
GARNL3-211ENST00000460176 MCF2P10911 925 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 ACTN1P12814 892 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 ATF7P17544 494 aaPredicted RBP11.2□□□□□ -0.62
GARNL3-211ENST00000460176 PPP1R2P41236 205 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 PMS1P54277 932 aaKnown RBP11.2□□□□□ -0.62
GARNL3-211ENST00000460176 WDR5P61964 334 aaKnown RBP11.2□□□□□ -0.62
GARNL3-211ENST00000460176 SNRPFP62306 86 aaKnown RBP11.2□□□□□ -0.62
GARNL3-211ENST00000460176 ZSCAN23Q3MJ62 389 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 CENPPQ6IPU0 288 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 SLC24A5Q71RS6 500 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 ZNF598Q86UK7 904 aaKnown RBP11.2□□□□□ -0.62
GARNL3-211ENST00000460176 C12orf56Q8IXR9 622 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 HERVK_113Q902F9 699 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 P2RX5Q93086 422 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 DHTKD1Q96HY7 919 aaPredicted RBP11.2□□□□□ -0.62
GARNL3-211ENST00000460176 ADPGKQ9BRR6 497 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 CBWD1Q9BRT8 395 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 TRAF3IP3Q9Y228 551 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 PCDHB2Q9Y5E7 798 aa11.2□□□□□ -0.62
GARNL3-211ENST00000460176 CITO14578 2027 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
GARNL3-211ENST00000460176 GBF1Q92538 1859 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 TRIM49BA6NDI0 452 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 PSMA7O14818 248 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 CLIC2O15247 247 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 EFCAB14O75071 495 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 GARTP22102 1010 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 CCNE1P24864 410 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 RAB27AP51159 221 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 DEFB103AP81534 67 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 TYRO3Q06418 890 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 STIM1Q13586 685 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 NOLC1Q14978 699 aaKnown RBP eCLIP11.19□□□□□ -0.62
GARNL3-211ENST00000460176 STX1AQ16623 288 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 DCAF4L1Q3SXM0 396 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 ZBTB41Q5SVQ8 909 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 C9orf50Q5SZB4 431 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 RASIP1Q5U651 963 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 ANKRD40Q6AI12 368 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 SLFN12LQ6IEE8 588 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 ARMCX5Q6P1M9 558 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 HS2ST1Q7LGA3 356 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 MRPL10Q7Z7H8 261 aaKnown RBP11.19□□□□□ -0.62
GARNL3-211ENST00000460176 ECHDC2Q86YB7 292 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 CEP120Q8N960 986 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 SMG8Q8ND04 991 aaKnown RBP11.19□□□□□ -0.62
GARNL3-211ENST00000460176 TMEM174Q8WUU8 243 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 POMGNT1Q8WZA1 660 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 MED15Q96RN5 788 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 TCHPQ9BT92 498 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 NXF3Q9H4D5 531 aaKnown RBP11.19□□□□□ -0.62
GARNL3-211ENST00000460176 DMAC2Q9NW81 257 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 CXXC1Q9P0U4 656 aaPredicted RBP11.19□□□□□ -0.62
GARNL3-211ENST00000460176 CGNQ9P2M7 1197 aaKnown RBP11.19□□□□□ -0.62
GARNL3-211ENST00000460176 CTNND2Q9UQB3 1225 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 HES2Q9Y543 173 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 IPPQ9Y573 584 aa11.19□□□□□ -0.62
GARNL3-211ENST00000460176 TDRD15B5MCY1 1934 aaKnown RBP11.18□□□□□ -0.62
GARNL3-211ENST00000460176 MEIS3P2A8K0S8 358 aa11.18□□□□□ -0.62
GARNL3-211ENST00000460176 OGTO15294 1046 aa11.18□□□□□ -0.62
GARNL3-211ENST00000460176 MEFVO15553 781 aaPredicted RBP11.18□□□□□ -0.62
GARNL3-211ENST00000460176 CALUO43852 315 aaPredicted RBP11.18□□□□□ -0.62
GARNL3-211ENST00000460176 HARSP12081 509 aaKnown RBP11.18□□□□□ -0.62
GARNL3-211ENST00000460176 SKIP12755 728 aa11.18□□□□□ -0.62
GARNL3-211ENST00000460176 GRM5P41594 1212 aa11.18□□□□□ -0.62
GARNL3-211ENST00000460176 MATR3P43243 847 aaKnown RBP eCLIP11.18□□□□□ -0.62
GARNL3-211ENST00000460176 LRRC63Q05C16 580 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms