RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 GNRHR2Q96P88 292 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 CAMKK2Q96RR4 588 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 CSRNP2Q9H175 543 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 PPP4R1LQ9P1A2 415 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 NCDNQ9UBB6 729 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 IPPQ9Y573 584 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 ZNF536O15090 1300 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 CCDC154A6NI56 674 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 ADCY6O43306 1168 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 PRPF3O43395 683 aaKnown RBP4.36□□□□□ -1.71
VPS8-215ENST00000460158 HTRA2O43464 458 aaPredicted RBP4.36□□□□□ -1.71
VPS8-215ENST00000460158 PHF2O75151 1096 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 RFPL1O75677 317 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 PLATP00750 562 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 WASP42768 502 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 SLC6A9P48067 706 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 WNT3AP56704 352 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 DUSP2Q05923 314 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 DUSP8Q13202 625 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 SLFN13Q68D06 897 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 FAM180AQ6UWF9 173 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 CATIPQ7Z7H3 387 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 TAX1BP1Q86VP1 789 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 CMTM4Q8IZR5 234 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 ZNF480Q8WV37 535 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 KRTAP3-1Q9BYR8 98 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 IL23AQ9NPF7 189 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 GPRC5DQ9NZD1 345 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 CHPF2Q9P2E5 772 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 SRRDQ9UH36 339 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 TRPS1Q9UHF7 1281 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 SAP30BPQ9UHR5 308 aaKnown RBP4.36□□□□□ -1.71
VPS8-215ENST00000460158 RCAN3Q9UKA8 241 aa4.36□□□□□ -1.71
VPS8-215ENST00000460158 A0A1W2PRX2 142 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 UBE2QL1A1L167 161 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 PMS2P1A4D2B8 440 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 NPEPPSL1A6NEC2 478 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 SUV39H1O43463 412 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 MARCH6O60337 910 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 ITGA10O75578 1167 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 POU2F2P09086 479 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 ZNF20P17024 532 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 PDCP20941 246 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 ECHS1P30084 290 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 FXR1P51114 621 aaKnown RBP eCLIP4.35□□□□□ -1.71
VPS8-215ENST00000460158 IL10RAQ13651 578 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 C3orf36Q3SXR2 165 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 RRP12Q5JTH9 1297 aaKnown RBP4.35□□□□□ -1.71
VPS8-215ENST00000460158 FAM102BQ5T8I3 360 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 LIMS2Q7Z4I7 341 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 GIMAP8Q8ND71 665 aaPredicted RBP4.35□□□□□ -1.71
VPS8-215ENST00000460158 REPS2Q8NFH8 660 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 FBXO18Q8NFZ0 1043 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 OR7D4Q8NG98 312 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 OR5M3Q8NGP4 307 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.35□□□□□ -1.71
VPS8-215ENST00000460158 TMEM176AQ96HP8 235 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 LRGUKQ96M69 825 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 NUP88Q99567 741 aaPredicted RBP4.35□□□□□ -1.71
VPS8-215ENST00000460158 PLA2G12BQ9BX93 195 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 GTPBP4Q9BZE4 634 aaKnown RBP4.35□□□□□ -1.71
VPS8-215ENST00000460158 ENKD1Q9H0I2 346 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 BCO1Q9HAY6 547 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 PNMA8BQ9ULN7 279 aaPredicted RBP4.35□□□□□ -1.71
VPS8-215ENST00000460158 SIK3Q9Y2K2 1263 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 PCDHA13Q9Y5I0 950 aa4.35□□□□□ -1.71
VPS8-215ENST00000460158 PLEKHD1A6NEE1 506 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 FAM171A2A8MVW0 826 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 WNT10BO00744 389 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 NRP1O14786 923 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 GPR42O15529 346 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 STC2O76061 302 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 GYPEP15421 78 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 VCAM1P19320 739 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 AKAP5P24588 427 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 CYP2C19P33261 490 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 CRHR1P34998 444 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 SREBF1P36956 1147 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 NPEPPSP55786 919 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 PER3P56645 1201 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 PRAMEF14Q5SWL7 426 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 TCTN3Q6NUS6 607 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 TMED8Q6PL24 325 aaPredicted RBP4.34□□□□□ -1.71
VPS8-215ENST00000460158 RHOT1Q8IXI2 618 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 PQLC1Q8N2U9 271 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 MDM1Q8TC05 714 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 KAT5Q92993 513 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 RAB24Q969Q5 203 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 HDAC10Q969S8 669 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 OR14A2Q96R54 314 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 UHRF1Q96T88 793 aaPredicted RBP4.34□□□□□ -1.71
VPS8-215ENST00000460158 C7orf25Q9BPX7 421 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 TCF25Q9BQ70 676 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 PDCD2LQ9BRP1 358 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 SSBP3Q9BWW4 388 aaPredicted RBP4.34□□□□□ -1.71
VPS8-215ENST00000460158 LDAHQ9H6V9 325 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 ANLNQ9NQW6 1124 aa4.34□□□□□ -1.71
VPS8-215ENST00000460158 ZMYM3Q14202 1370 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 FOXS1O43638 330 aa4.33□□□□□ -1.72
VPS8-215ENST00000460158 ENDOD1O94919 500 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms